Gene Shew185_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0121 
Symbol 
ID5372374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp143288 
End bp144091 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content50% 
IMG OID640828309 
Producthypothetical protein 
Protein accessionYP_001364355 
Protein GI152998674 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCATAC TCTTTGTCGC CATTAATGCC CATCCTAAGT ATCCCTTAAT CATCTGTGCC 
AACCGCGATG AGTTTCACCA TAGACCGACC GCGCCAGCGC ACTTTTGGTC ACCAGAAGAA
AATATACTTG CAGGTAAAGA TCTGCAGGCG GGCGGCACTT GGTTTGGGGT GAATAAACAG
GGACAAGTCG CCGCTGTGAC GAATCTGCGC GTACCGCAAA AGAACCCAGA AGCCATGCGT
AGCCGCGGTG AACTCATCAC TATGACCCTA AGTTCAGGCT CGCTCATTTG CCCAAATTGG
CTCATTGAGC ACAGTGACAA TTATCAGCCA TTCAATCTCG TCTTCGGCCA AGGCACTGAC
TTATATTGTT TTAACAGTAT CAATAAAGAC ACAGTCAAAC TCGCCGATGG GTTTCATGCC
ATTAGCAATG GGGCGCTCGA TGATATTTGG CCGAAAATGG CGAAGGGACA GCAAGCGCTA
GAAGCCGTGA TCAATCAGTC CGACAACCTA GAAGTGCAAG CGCTGTTACA GCTGATGAAA
GACGACTCCC AACCACAAGA TAATGAATTA CCTAACACGG GAGTGGGGAT CGAGTGGGAA
CGGCGCTTAG CCGCAATTTA TATTCGTCAC CCCGACTATG GCACGCGCTC CACCAGTATT
CTGCTTGAAG ATGCTGAGGG CGGCATGCAT TTCACCGAAG TGAGATACGA CGGCAAAGGT
AGACAGCTCG GACAGCAGGA TTTCCATTTA ACCCTGCCCG CCGAGCCACC CGCTAAGCCA
GACTGTTTAT TAACGCAAAT CTAA
 
Protein sequence
MCILFVAINA HPKYPLIICA NRDEFHHRPT APAHFWSPEE NILAGKDLQA GGTWFGVNKQ 
GQVAAVTNLR VPQKNPEAMR SRGELITMTL SSGSLICPNW LIEHSDNYQP FNLVFGQGTD
LYCFNSINKD TVKLADGFHA ISNGALDDIW PKMAKGQQAL EAVINQSDNL EVQALLQLMK
DDSQPQDNEL PNTGVGIEWE RRLAAIYIRH PDYGTRSTSI LLEDAEGGMH FTEVRYDGKG
RQLGQQDFHL TLPAEPPAKP DCLLTQI