Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0121 |
Symbol | |
ID | 5372374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 143288 |
End bp | 144091 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640828309 |
Product | hypothetical protein |
Protein accession | YP_001364355 |
Protein GI | 152998674 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCATAC TCTTTGTCGC CATTAATGCC CATCCTAAGT ATCCCTTAAT CATCTGTGCC AACCGCGATG AGTTTCACCA TAGACCGACC GCGCCAGCGC ACTTTTGGTC ACCAGAAGAA AATATACTTG CAGGTAAAGA TCTGCAGGCG GGCGGCACTT GGTTTGGGGT GAATAAACAG GGACAAGTCG CCGCTGTGAC GAATCTGCGC GTACCGCAAA AGAACCCAGA AGCCATGCGT AGCCGCGGTG AACTCATCAC TATGACCCTA AGTTCAGGCT CGCTCATTTG CCCAAATTGG CTCATTGAGC ACAGTGACAA TTATCAGCCA TTCAATCTCG TCTTCGGCCA AGGCACTGAC TTATATTGTT TTAACAGTAT CAATAAAGAC ACAGTCAAAC TCGCCGATGG GTTTCATGCC ATTAGCAATG GGGCGCTCGA TGATATTTGG CCGAAAATGG CGAAGGGACA GCAAGCGCTA GAAGCCGTGA TCAATCAGTC CGACAACCTA GAAGTGCAAG CGCTGTTACA GCTGATGAAA GACGACTCCC AACCACAAGA TAATGAATTA CCTAACACGG GAGTGGGGAT CGAGTGGGAA CGGCGCTTAG CCGCAATTTA TATTCGTCAC CCCGACTATG GCACGCGCTC CACCAGTATT CTGCTTGAAG ATGCTGAGGG CGGCATGCAT TTCACCGAAG TGAGATACGA CGGCAAAGGT AGACAGCTCG GACAGCAGGA TTTCCATTTA ACCCTGCCCG CCGAGCCACC CGCTAAGCCA GACTGTTTAT TAACGCAAAT CTAA
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Protein sequence | MCILFVAINA HPKYPLIICA NRDEFHHRPT APAHFWSPEE NILAGKDLQA GGTWFGVNKQ GQVAAVTNLR VPQKNPEAMR SRGELITMTL SSGSLICPNW LIEHSDNYQP FNLVFGQGTD LYCFNSINKD TVKLADGFHA ISNGALDDIW PKMAKGQQAL EAVINQSDNL EVQALLQLMK DDSQPQDNEL PNTGVGIEWE RRLAAIYIRH PDYGTRSTSI LLEDAEGGMH FTEVRYDGKG RQLGQQDFHL TLPAEPPAKP DCLLTQI
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