| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0117 |
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| Symbol | |
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| ID | 5369675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 140126 |
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| End bp | 141391 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828305 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001364351 |
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| Protein GI | 152998670 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGATCAGG AAATAAGGTT CGAAATTTCG GCATGGTTAG CGGGCTTTGG GATTGATAGC
CAACCCTCGG ACGGCATATC AACCAGCATC ATGATCATTG CCTGCTTACT GCTCGCGGGC
ATCGCTTATT TCATTGTTCG ACGCGTAGTC ATACGTGCGG TCAACATGGT GATCCTCCGC
TCCAAAGTCA CTTGGGACGA TGTGTTCATG CGTTACAAGG TGCTCGAAAA GCTGGCCATG
CTAGTGCCTG CAATCGTGCT CAATCTATTA GTGCCCATCG CCTTAACCGA ACATCAAATC
TTAAGTAATT TAGTCGATCG GCTACTGAGT ATTTGGCTGG TGGTGCTGAT GATCCGCGCT
ATTTATGCGG GTTTAGATGC GGTCGACGAA ATTTCAGATG TGAATCTGGT GAGCCGGCGT
TTACCCGTTA AAAGCTTTGT GCAGTTAACT AAGCTGTTTT TATTCTTTGT CGGTATTATC
GTTTCTATCT CAATCTTGGC CGATCAGTCG CCTGTGTACT TCCTCAGCGG CTTAGGTGTG
GCGACGGGTT TTGTGATGTT AGTGTTCCGC GACACTATCT TAGGTTTCGT GGCGGGCATT
CAGTTAGCGG CTAACCGTAT GGTGAGCAAG GGCGACTGGA TCCAGATGGA CAAATACGGC
GCCGACGGTG CGGTAGAAGA AGTCTCGCTG ACCACGGTCA AAGTGCGCAA CTGGGACAAA
ACCATCACTA TGATCCCAGC CTATGCCTTA GTGTCGGATG CGTTTCGCAA CTGGCGGGGT
ATGTCTGAGT CGGGTGGTCG TAGGATCAAA CGCGCCATCA ATATCGATAT CAACAGCATT
AAGTTTTTGA GCGAGGAAGA GCGCGAGCGT CTGAGTAAGA TCAATTGCTT AAAAGAATAT
TTCCCCGCCA AAATCAACGA AATCCGTGAG TCGAATGCCA GAGTGTCTGA CCTCGACATG
AAAGTAAACG GTCGCCATTT GACCAACGTC GGTACCTTCC GTGCTTACCT GCAGGAATAC
CTACAGCGTC ACGATAAAAT CCATAAGGAA ATGACCTTAA TGGTGCGCCA ATTAGCGCCG
ACCACTGAGG GATTGCCGAT CGAGGTTTAT ATCTTCACCA ACGATACTCG CTGGGCATTT
TATGAAGCGA TACAAGCGGA TATCTTCGAC CATATTTTTG CGATATTGCC TGAGTTTGGT
CTGCAGGCAT TCCAAGCGCC AACGGGCAAC GATATTCGTA GCTTAAAGTC GGTTAAGGTT
GACTAG
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| Protein sequence | MDQEIRFEIS AWLAGFGIDS QPSDGISTSI MIIACLLLAG IAYFIVRRVV IRAVNMVILR
SKVTWDDVFM RYKVLEKLAM LVPAIVLNLL VPIALTEHQI LSNLVDRLLS IWLVVLMIRA
IYAGLDAVDE ISDVNLVSRR LPVKSFVQLT KLFLFFVGII VSISILADQS PVYFLSGLGV
ATGFVMLVFR DTILGFVAGI QLAANRMVSK GDWIQMDKYG ADGAVEEVSL TTVKVRNWDK
TITMIPAYAL VSDAFRNWRG MSESGGRRIK RAINIDINSI KFLSEEERER LSKINCLKEY
FPAKINEIRE SNARVSDLDM KVNGRHLTNV GTFRAYLQEY LQRHDKIHKE MTLMVRQLAP
TTEGLPIEVY IFTNDTRWAF YEAIQADIFD HIFAILPEFG LQAFQAPTGN DIRSLKSVKV
D
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