Gene Shew185_0111 details

Gene Information

• Locus tag: Shew185_0111
• ID: 5372298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 135834
• End bp: 136472
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640828299
• Product: hypothetical protein
• Protein accession: YP_001364345
• Protein GI: 152998664
• COG category: [S] Function unknown
• COG ID: [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAT TAATCAATAA GATGTTGAAT AATCGGCTGG GCTTCACTCG GTATTGCGCC 
GCCGTTGTGA TGGTGAGTTC GTTAAGTACA GGAGCGATGG CGGCCGATGT GCCGTCCTTT 
GACTGCACAA AAGTCGATGC GGGCAGTATC GAAGCTATGG TCTGTAAGGA TGCGGGACTG 
AGCCAACTCG ATAATAACTT AGCTGAGGTT TACAGCCAAG CGCTTGAAAA AGCAAAGAAT 
GAACAGCCAC CGACTTTAAA AGCGATGCAG CGTGGTTGGG TGAAAGGCCG TAATGAGTGT 
TGGAAGAGCG ACGATAAACA CGCGTGTATT GAAGCTAGCT ATCAAACCCG TATTGCCGAA 
CTGCAGGCGC AGTACCGTTT AGTCGATATG ACCGGCCCAG TGTTTTATGC CTGTAACGGC 
AATCCTGCTA ATGAAGTCGT GGTGACTTAT TTTAAAACCG AACCCGCGAC TCTAATTGCT 
GAACATGGTG ATAGTACTTC ATTGATGTTT GTACAACCCA GCGGCAGTGG TGCTAAGTAT 
CAAGGCCGCA ATGAAAGTCT TTGGGAACAT CAAGGCGAAG CGAAAGTGGT TTGGGGCTTC 
GAAGCGCCAG AAATGACGTG TAAACTGGTG ACCAAATAG 

 

Protein sequence

MAKLINKMLN NRLGFTRYCA AVVMVSSLST GAMAADVPSF DCTKVDAGSI EAMVCKDAGL 
SQLDNNLAEV YSQALEKAKN EQPPTLKAMQ RGWVKGRNEC WKSDDKHACI EASYQTRIAE 
LQAQYRLVDM TGPVFYACNG NPANEVVVTY FKTEPATLIA EHGDSTSLMF VQPSGSGAKY 
QGRNESLWEH QGEAKVVWGF EAPEMTCKLV TK