Gene Shew185_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0109 
Symbol 
ID5372296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp133254 
End bp134588 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content48% 
IMG OID640828297 
Productpeptidase M48 Ste24p 
Protein accessionYP_001364343 
Protein GI152998662 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAG TTATTACCCC AACCGCAGGG AAAGATAATC CCATCCAAAT GACAGATATT 
GTCTATTCGA AGGAAAAATC GCTGTTCACT CTGTTAGCGA TTATCTCAGG GATCGTCTGG
GCAGCATTAA TCATAGGTAC TTTGGGCATG GCCCTGCTCT ATGTGTTGAT GTTTTTCATT
ATTTATCTTT TCAGCCACTC CGCTTTTATT AGCTACCTAA AAGGTACAGC TGTCGAAATC
AATGCTGAGC AATTCCCTGA ATTACATAAA CAATATTTAG CATGCTGCGA TCGTTTAGAA
ATGAAAGAGC CACCACGAGC TTACTTGTTG GCCGCCGATG GCATGCTCAA CGCGCTGGCA
ACCCGCTTCC TCGGCCGTAA CTATATAGTA CTATTTTCAT CGATTGTGGA TGCGCTTGAG
TCCGATAAAG ATGCACTTAA CTTCTATATC GGCCACGAAT TAGGCCATAT TCGCCGCAAT
CATATTGGCA AGGCCCCCTT TTTAGTCTTC GCCACTTGGT TGCCTTTAGT GGGTGCGGCT
TATTCTCGCG CCTGTGAATA TACCTGCGAT CTCCACGGGT TACGTTGCTG CAACAGCTTA
CGTTCTGCCA CCAATGCCGT CGCCGTATTA GCCGCTGGCG TAGAGCAATG GAAACGTATG
AATGTGGATC AATATATCCG CCAAGCTCGC GAATCGAGTG GTTTTTGGAT GTCACTGCAC
GAGCTTAACG GCAGCTATCC TTGGCTGACT AAACGTATGG CAAGAGTCGA CGCCAAAGCG
CAGGGAACGG AATACACGCC GCCATCACGC AGTGCATGGG CATTTGTATT TAGCCTCTTT
ATGCCACGCA TGGGCACAGC TGGCGGTGGA CTCATTATTT TTGCTGCGAT TATTGGTGTT
GCCGCCGCAG TTGCGTTGCC AGCGTACAAG CAATATCAAG AAAAGATGAC TGCAGCCACG
AGTTATGAAG CCCCGGCCGC AACCGAAGCG ACACCAGCAG CTATGACTGT GCCTGACGCA
ACACTCGCCA TTGCCAGTAT CGATCAGCAG CACCAAGCAC TGACGCCGAT CACCGACATC
TTAGTTGGCT ATTATCAAAC CAACCAAGCA TGGCCAACTG AATTAGATGC CCTAAAGCTG
ACGGACGAGC AGATTGCGAC ATTTAATTTG TACACAGATG GCATAGTCGG CTTTGTTGGA
GGCGAAGCCC TCGGTGATTA TCAAGGCTAC GAAGTCTATC TATCGCCACA AGTCGATGAG
CAAAGCAATA TCACTTGGGT ATGCAGCAGT AGCGACATTC CCGACGAATA TCTGCCAGTA
GATTGCCAAG GCTAA
 
Protein sequence
MEQVITPTAG KDNPIQMTDI VYSKEKSLFT LLAIISGIVW AALIIGTLGM ALLYVLMFFI 
IYLFSHSAFI SYLKGTAVEI NAEQFPELHK QYLACCDRLE MKEPPRAYLL AADGMLNALA
TRFLGRNYIV LFSSIVDALE SDKDALNFYI GHELGHIRRN HIGKAPFLVF ATWLPLVGAA
YSRACEYTCD LHGLRCCNSL RSATNAVAVL AAGVEQWKRM NVDQYIRQAR ESSGFWMSLH
ELNGSYPWLT KRMARVDAKA QGTEYTPPSR SAWAFVFSLF MPRMGTAGGG LIIFAAIIGV
AAAVALPAYK QYQEKMTAAT SYEAPAATEA TPAAMTVPDA TLAIASIDQQ HQALTPITDI
LVGYYQTNQA WPTELDALKL TDEQIATFNL YTDGIVGFVG GEALGDYQGY EVYLSPQVDE
QSNITWVCSS SDIPDEYLPV DCQG