Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0098 |
Symbol | |
ID | 5371016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 119356 |
End bp | 120897 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640828286 |
Product | histidine ammonia-lyase |
Protein accession | YP_001364333 |
Protein GI | 152998652 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTG TGAATCACTT AGTGTTAACG CCGGGCAGCT TGAGCCTAGC GCAATTACGC GAAATCAGCC GCCATAAGCT GACACTCGAA CTCGCGCCAG AGGCCATTAC CGACATCAAC ACCAGCGCGC AAATCGTGCA AAAAGTGCTG GATGAAGGCC GCACCGTTTA CGGCATCAAC ACGGGTTTTG GCTTGTTGGC CAATACCAAG ATAGCGCCCG AAGATCTGCA ATTGCTGCAA CGCTCTATCG TGTTGTCGCA CGCTGCTGGT ACGGGCCAAT ACATGCAAGA CGCCACAGTG CGCTTGATGA TGGTGTTAAA AATCAATTCA TTAAGCCGTG GCTTCTCGGG CATTCGTTTA GAAGTGATTA ACTTCTTAAT CCGTTTAGTG AACGCCGAAG TGTATCCCTG CGTGCCAGAA AAAGGCTCAG TGGGCGCATC GGGCGATTTA GCGCCACTGG CGCACATGTG TTTGCCTATG CTGGGCGAAG GCGAGATGAG CTATCGAGGT GAGTTAATTT CTGCCGCTGA AGGTTTAGAA ATCGCCGGCC TTAAGCCAAT CGATTTAGCG GCCAAAGAAG GGCTAGCTTT GCTTAACGGC ACACAAGCCT CGACTGCGCT GGCGCTAGAA GGGTTATTCC ACGCCGAAGA CTTGTTTGCT GCAAGTTCAG TGATCGGCGC CATGAGTGTT GAAGCGGCGA TGGGCAGTCG TAGCCCGTTC GATCCTCGCA TCCATGCAGC TCGTGGTCAG AAAGGTCAAA TCGATTCGGC CATGGTTTTC CGTCATCTAT TGGGTGAAGA GTCTGAGATC AGCGTAAGCC ATGCAAACTG TGAAAAGGTG CAAGATCCTT ACTCACTGCG CTGTCAGCCA CAGGTACTTG GCGCTTGCTT GACCCAAATT CGTCACGCGG CCGAGGTGTT AGGCACTGAG GCCAACGGCG TAACCGATAA CCCACTGGTG TTCCAAGACA CGGGCGATAT CATTTCAGGC GGTAACTTCC ACGCTGAGCC TGTGGCTATG GCGGCGGATA ATCTGGCGAT TGCGATTGCC GAATTGGGCT CTATTGCCGA GCGTCGTATC GCACTGTTAA TCGATTCTAG CCTGTCGAAA CTGCCGCCTT TCCTGGTGAA AAATGGCGGC GTGAACTCAG GCTTTATGAT CGCTCAAGTA ACAGCGGCAG CTTTGGCGTC TGAGAATAAA ACCTACGCCC ATCCAGCATC GGTAGACAGT TTACCGACAT CTGCTAACCA AGAAGATCAC GTCTCTATGG CGACGTTTGC GGCCCGTCGT TTGCGCGATA TGAGTGAAAA CACCCGTGGC GTATTGGCGA TTGAATTGTT AGCGGCGGCG CAGGGTTTAG ATTTTCGCGC ACCTTTAGCG CCAAGTACTG CGGTGGCTAA GGCCAAAACT GAATTGCGTG AAGTCGTCGC CTATTACGAT AAAGACAGAT ATTTCGCGCC AGATATCGAA GCCGCGACAG ACCTGTTATA TACAGCGAGT TTTAACGCTT ACCTGCCAGC AGGAACGCTA GCGAGCTTTT AA
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Protein sequence | MKSVNHLVLT PGSLSLAQLR EISRHKLTLE LAPEAITDIN TSAQIVQKVL DEGRTVYGIN TGFGLLANTK IAPEDLQLLQ RSIVLSHAAG TGQYMQDATV RLMMVLKINS LSRGFSGIRL EVINFLIRLV NAEVYPCVPE KGSVGASGDL APLAHMCLPM LGEGEMSYRG ELISAAEGLE IAGLKPIDLA AKEGLALLNG TQASTALALE GLFHAEDLFA ASSVIGAMSV EAAMGSRSPF DPRIHAARGQ KGQIDSAMVF RHLLGEESEI SVSHANCEKV QDPYSLRCQP QVLGACLTQI RHAAEVLGTE ANGVTDNPLV FQDTGDIISG GNFHAEPVAM AADNLAIAIA ELGSIAERRI ALLIDSSLSK LPPFLVKNGG VNSGFMIAQV TAAALASENK TYAHPASVDS LPTSANQEDH VSMATFAARR LRDMSENTRG VLAIELLAAA QGLDFRAPLA PSTAVAKAKT ELREVVAYYD KDRYFAPDIE AATDLLYTAS FNAYLPAGTL ASF
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