Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0083 |
Symbol | |
ID | 5373278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 103222 |
End bp | 103608 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640828272 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001364319 |
Protein GI | 152998638 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATC AAAGGTATGT GCAGGGCTTA GCTAAGCTGA CTGAAATCGA CGGCGAGGCG GGCGAGAAAG TGATCAGCTG TCTGGCAAAT ATTTGCCCCG ACTTGGGCAA GTACATTATC GAATATCCTT TTGGGGATAT TTATCAACGT GAAGGACTCG ATCTTAAGAC GCGGGAGCTA GTCACGGTCG CGGCGCTCAC GGCGTTGGGG CATTGTCAGC CGCAGCTTAA CGTCCATATC AACGGCGCGT TGAATGTCGG TTGTGCACCG CAGGAAATCG TTGAAGTGAT ACTGCAAATG TCTGTTTATG CTGGCTTCCC CGCAGCACTG AATGGCATGT TCGTCGCGAA AGCTGTCTTT GCCGAGCGGG AGTTAAATGT CGTTTGA
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Protein sequence | MSNQRYVQGL AKLTEIDGEA GEKVISCLAN ICPDLGKYII EYPFGDIYQR EGLDLKTREL VTVAALTALG HCQPQLNVHI NGALNVGCAP QEIVEVILQM SVYAGFPAAL NGMFVAKAVF AERELNVV
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