| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0067 |
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| Symbol | |
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| ID | 5373292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 86659 |
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| End bp | 88947 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828256 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001364303 |
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| Protein GI | 152998622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCCG TTTATCTAGC CTTAGTCGCC CTAGCCGTTA TATTGCTAGG GCTTAGACTT
TGGCCTGCGC AGCCATTGAG TCAACTGATG CCCAGTTCAC GTGAGGTGTT GGCTGCCGAT
GGCTCTTTAA TGCGCCTGAC CTTAGCCACT GATGGCCAAT ATCGACTCTG GCAAGATTTA
GAGGATATCT CCCCCATCAT GATTAAGGTC ATGTTGTTAA AGGAAGATCG CTATTTCTAT
TATCACCCAG GTGTTAATCC AGTCGCATTA GTACGTGCCA TGTTAGCCAC TTATGTGGGC
GGTGATCGTC AAGGTGCCTC GACCCTGACT ATGCAGTTAG TTCGTCGAGT TTATGATATT
AACAGTCGCA CTGTGTCGGG CAAATTAGAG CAGATCTTGG CGGCATTTTG GTTAGAGGCT
CGTTATAGCA AGCATGAGCT ATTAGAGGCT TATCTTAACC TCGCTCCCAT GGGGGGCAAT
ATCGAAGGGG TTGGTGCTGC AAGTCAGATT TATTTCCATA AAATCGCGGG TGAGTTGTCT
TTGAGCGAAG CCTTGAGCTT AGCGGTTATG CCTCAGAGTC CGGCGCGTCG GGCTCGATTT
CAGGCAGACT TTCAAGCGGC GAGGGATAGG TTGGCGCTAT TTTGGCAGCA GACCTATCCA
GATGATCCTC GTAATCAAGG CTTGTTGGTG TTGACGGCCC TAGGGGCTGA ACGCAACGAG
CTGCCTTTTA AGGCGCCCCA TTTTACTCGT CGACAACTAC GCCAAGACGC GACCATTATT
CACACGACAA TAGAGCCTAA GTTACAAACG CTGCTGGAAC TGCGAATTCG TCAGTATGTT
GCGGGTAAGC GCCATTTAGG CGTGAATAAT GCCACAGCGC TATTGATCGA TACCCGTGAT
CAGGCGATTA AGGCTTGGGT AGGGTCCGCT GATTTTTTTA ATCCCATGAT TTATGGTCAG
GTTGATGGTG TTGTCGCCCG TAGATCTCCG GGTTCAACTC TGAAACCCTT TCTGTATGCC
TTAGGGTTAG ATCAAGGGAT TATTCATCCC CAAAGTATCA TTAAAGATGC GCCTACCGCT
TTTGGGAGTT TTGAACCGGA GAATTTCGAC CATCGCTTCA CGGGCCCTAT TAGTGCCCAC
GATGCTTTGA TCAAGAGCCG CAATCTGCCA GCCGTCTGGC TGGCCGGACA GTTGACTCGC
CCTAATTTGT ACGGCTTTTT ACGACAAGCC CAGATACTTG GTCTAAGGGG AGAAAGCCAT
TATGGGCTGG CACTTGCCTT AGGGGGTGGC GAGTTGACTA TGATGGAACT TGGCAGACTC
TACCTAATGC TAGCGAGTGA GGGACGTTAT TATCCTTTAC GGGAGAGGAC AGATCAGCCC
ATTAATCCGC CGAGCACTCA GTTATTGAGT CCAGCGGCGA GCTTTCTTGT ATTGGATATG
CTTAAAGACA ATCCGCGCGC CGATGGTTTA CCTAAGCAGG GCTGGCGTGT GGCTTGGAAG
ACGGGCACCT CTTGGGGATT CCATGATGCC TGGAGCGCTG GCGTCGCTGG CCCCTATGTA
TTGGTGGTCT GGGTAGGGAA TTTCGATGCA ACGCCAAATG CTGCTTTTAT TGGTGCTGAA
ATAGCTGGGC CATTATTTTT TAGCATCAGT GATGCTTTGC AGGCAAGTCT GCCGAGTACC
GCCGATAAAG CCTTAGCTCA ACCCAGTACA GTGAAAAAAG TGAACATTTG CGCCGAATCA
GGTGAATTGC CTAACCTGTG GTGCCCTAAA GTGGTTGAGG GTTGGTTTAT TCCCGGCGTC
TCCCCCGTCA AAGTGTCTAC GCTACATCGT CCTGTTTGGG TTGATAATCA AACGGGTATG
GCTGTGTGCC CACCCTATGA TACTCAAACC CAGCACCAAG AAGTCTTCGC GTTCTGGCCT
TCGGACATGG CGAGTTTATT TGAGCAGGCG GGGCTACCGC GCAAGTTGGC GCCACAGTTG
CCCGAATCGT GTCGTAACAC TATTCAGCTC ACTAACATAG ATCCTGTTAT TCGCTCCCCC
CTGAGAAATG TCACTTATAG CTTGAGACAA AGTCATTTAA ATGAACATAT TGCATTGAAG
GCCGATGCCG CATCCGACGC GAGTATGTTG TACTGGTTTG TTGGGCGGGA TCTCATCGGC
CAAAGCTTAC CGAAACAGAC CTTAGAGTGG CGGCCCTCGA CGGCGGGTGA CTATAAGTTA
TCTGTCACTG ACGACAAGGG GCGTAGTGCG AGTTTGAATC TTAATGTCAG CATCTTGCAG
CAACCCTAA
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| Protein sequence | MRSVYLALVA LAVILLGLRL WPAQPLSQLM PSSREVLAAD GSLMRLTLAT DGQYRLWQDL
EDISPIMIKV MLLKEDRYFY YHPGVNPVAL VRAMLATYVG GDRQGASTLT MQLVRRVYDI
NSRTVSGKLE QILAAFWLEA RYSKHELLEA YLNLAPMGGN IEGVGAASQI YFHKIAGELS
LSEALSLAVM PQSPARRARF QADFQAARDR LALFWQQTYP DDPRNQGLLV LTALGAERNE
LPFKAPHFTR RQLRQDATII HTTIEPKLQT LLELRIRQYV AGKRHLGVNN ATALLIDTRD
QAIKAWVGSA DFFNPMIYGQ VDGVVARRSP GSTLKPFLYA LGLDQGIIHP QSIIKDAPTA
FGSFEPENFD HRFTGPISAH DALIKSRNLP AVWLAGQLTR PNLYGFLRQA QILGLRGESH
YGLALALGGG ELTMMELGRL YLMLASEGRY YPLRERTDQP INPPSTQLLS PAASFLVLDM
LKDNPRADGL PKQGWRVAWK TGTSWGFHDA WSAGVAGPYV LVVWVGNFDA TPNAAFIGAE
IAGPLFFSIS DALQASLPST ADKALAQPST VKKVNICAES GELPNLWCPK VVEGWFIPGV
SPVKVSTLHR PVWVDNQTGM AVCPPYDTQT QHQEVFAFWP SDMASLFEQA GLPRKLAPQL
PESCRNTIQL TNIDPVIRSP LRNVTYSLRQ SHLNEHIALK ADAASDASML YWFVGRDLIG
QSLPKQTLEW RPSTAGDYKL SVTDDKGRSA SLNLNVSILQ QP
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