| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0060 |
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| Symbol | |
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| ID | 5371483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 72187 |
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| End bp | 73218 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828249 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001364296 |
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| Protein GI | 152998615 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA CAAAACACTG GACCCTAAAG AGCATAGCCA ACGAGTTGGG TGTCTCTAAT
GCCACTGTTT CTAACGCGTT TAATCGCCCC GACCAATTAT CGGAAAAACG TCGTAACGAC
ATTTTAGCTG CCTGCACTAA GTTAGGATAT TTCGGACCGA ATAAAGCGGC TCAATCCCTA
CGTAAGGGCA AGTTCGATAC TGTCGCCTTG GTACTGTCGG ACAGCGTGGA ATACATGGTG
TCCGATCCTG TCGCCAGTAA ATTTATGAAG GGCGTGGCCT CTGTCTTGGA GCAAGAGAAA
CTCAATTTGC TACTATTTTC GGGCAGTTCA GACAGTGTGA ATGCGGTGGC CGACTTTGTG
GATGGTTTTA TCTGTTATGG TCGCCCGCGC AATGCCCTGT TAGCCGAGCA GTTAAAGCAG
GTAAAGAAAA AGGTCGTCAC GGTCGATTTT GATATCCACC GCAATGCATC TGTGAGCATA
GACAATAAGT TAGCCGCCTA TGAAGTGGCT AAATTGGCAT TGCAATCACC CGCGGACAAT
GTCGCTATTT TAGGGTTACG TTTGCTCGAT ACCCACTTAA CTTGCCGCGT GTATGATTTG
AATTTGTTAG AAATCGACAC CTCTGTTGCC CATCAAAGAT TACAGGGTTA CTTGCAAGCG
ATTGAAGAAG TGGGCGTTGT ACTGGGGCAG GACCGCATTT GGAATATCCC CGAGAGCAAT
GCCGACTATG CGGCGATAGC GGCAAAAGAA GCGTTGAATT CGACTCCACG GCCGAATGTA
TTTTTATGCA TGAGTGACTT AATCGCCTTG AGTGTGCTCG GTGAGGCGCA GGCCATGGGG
CTGAGTGTTC CTGAAGATGT GCGAGTAGTG GGCTTTGATG GTATAGATGA AGGCACACGT
TCAAATCCGC CGTTAACGAC CGTCTATCAA TACTCTGAGC AGAAGGGCCG GAAAGCGGCG
CAAATGTTTG TTAGTGATGC TGTGCATGCG GAAGTCTTGG GCTATGAATT ACGCCTCGGT
AAGAGCTGCT AA
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| Protein sequence | MTTTKHWTLK SIANELGVSN ATVSNAFNRP DQLSEKRRND ILAACTKLGY FGPNKAAQSL
RKGKFDTVAL VLSDSVEYMV SDPVASKFMK GVASVLEQEK LNLLLFSGSS DSVNAVADFV
DGFICYGRPR NALLAEQLKQ VKKKVVTVDF DIHRNASVSI DNKLAAYEVA KLALQSPADN
VAILGLRLLD THLTCRVYDL NLLEIDTSVA HQRLQGYLQA IEEVGVVLGQ DRIWNIPESN
ADYAAIAAKE ALNSTPRPNV FLCMSDLIAL SVLGEAQAMG LSVPEDVRVV GFDGIDEGTR
SNPPLTTVYQ YSEQKGRKAA QMFVSDAVHA EVLGYELRLG KSC
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