Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0056 |
Symbol | |
ID | 5370508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 67855 |
End bp | 69099 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828245 |
Product | major facilitator transporter |
Protein accession | YP_001364292 |
Protein GI | 152998611 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAG AGATGAACCG TACTCGGTAC CTGACCTTAG TTGGTACTAT TATCACCCAG TTTGCACTCG GCTCAGTTTA CACTTGGAGC CTGTTCAATG CGCAGTTGGC CGCTAAGCTC GACGAACCTG TCAGCCAAGT GGCGTTTGTA TTTGGTTTGC TGAGTTTGTC TTTGGCCGTG GCTTCTTCCA TGGCGGGCAA ATTACAGGAA CGCTTCGGCG TGCGTAATGT CACCTTAGGC GCAGGCCTAT TACTCGGGCT GGGATTCTTA CTCACTGCCC AAGCCAGTAA CTTGATGATG CTTTATCTGT GTGCCGGGAT TTTAGTGGGC TTTGCCGATG GCACTGGCTA CTTAATGACT TTATCTAACT GCGTGAAGTG GTTTCCCGAA CGCAAAGGGC TGATTTCGGC GTTAGCGATT GGCGCCTATG GTTTAGGTAG CCTTGGATTT AAGTACATCA ACGTGCTGTT ACTCGAAAAT ACTGGCCTTG AAACTACCTT CCAACTTTGG GGCTTAATCG CCATGGCGCT GGTGTTATGT GGCGGCATGT TGATGAAAGA TGCGCCTGCA CAATCAGCCG CAAGTCAGCA AGCCGAAAGC CGCGACTTCA CCCTCGCAGA AGCCATGCGT AAACCACAAT ACTGGATGCT GGCGCTGATG TTCCTGTCTG CCTGTATGAG TGGTTTGTAT GTGATTGGTG TAGCGAAAGA TATCGGCGAG AAGATGGTCG ACTTGCCAGT ACTGGTGGCT GCTAATGCGG TTGCGGTAAT TGCCATGGCG AACCTCAGTG GTCGTTTGGT GCTGGGTATC CTGTCGGACA AAATTCCTCG CATTCGGGTT ATTTCGCTGG CGCAGATCAT CACCTTAGTC GGTATGGTAT TACTACTGTT TGTACCTTTG AATGCTAACC TGTTCTTCGT TGCCGTTGCC TGCGTTGCCT TTAGTTTTGG TGGCACTATT ACTGTTTATC CCTCACTGGT GAGCGACTTC TTCGGCCTGA ATAACCTGAC TAAAAACTAT GGGGTTATCT ACTTAGGTTT TGGTGTCGGC AGCATTATCG GTTCGATTGT CGCCTCGTTA TTCGGTGGCT TTATTGCGAC CTTCAACGTG ATTTTAGTGC TGCTGGTGGT GGCGTTAGTG ATGTCATTAA CCATACGTTT ACCAGAACCT AAAAACCCAG TGTCAGCCAA GAAAGCGACT AAGAGTACAC CGCGCTTAGT GAACATGACG GCAGAATCGG CTTAA
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Protein sequence | MTKEMNRTRY LTLVGTIITQ FALGSVYTWS LFNAQLAAKL DEPVSQVAFV FGLLSLSLAV ASSMAGKLQE RFGVRNVTLG AGLLLGLGFL LTAQASNLMM LYLCAGILVG FADGTGYLMT LSNCVKWFPE RKGLISALAI GAYGLGSLGF KYINVLLLEN TGLETTFQLW GLIAMALVLC GGMLMKDAPA QSAASQQAES RDFTLAEAMR KPQYWMLALM FLSACMSGLY VIGVAKDIGE KMVDLPVLVA ANAVAVIAMA NLSGRLVLGI LSDKIPRIRV ISLAQIITLV GMVLLLFVPL NANLFFVAVA CVAFSFGGTI TVYPSLVSDF FGLNNLTKNY GVIYLGFGVG SIIGSIVASL FGGFIATFNV ILVLLVVALV MSLTIRLPEP KNPVSAKKAT KSTPRLVNMT AESA
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