Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0035 |
Symbol | aroE |
ID | 5372000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 39977 |
End bp | 40825 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640828220 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001364271 |
Protein GI | 152998590 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.265435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACA GATACGCAGT GTTTGGCAAT CCAATTAGCC ACAGTAAATC GCCGTTCATC CATGGACAAT TTGCCGCGCC CACCCAAGAG TCATTAACCT ATGAAGCCAT TCTCGCTCCG GTCGATGGTT TTGAAGCCTC ATTGACGGCG TTTTTCAATG CGGGCGGCAA GGGCGCCAAT GTGACTGTGC CTTTTAAGGA GCAAGCTTTT GCGCTGTGTG ACAGTATCAG CCCCGAAGCC AAACTCGCTG GCGCAGTCAA CACCTTAAGT TTATTGGCCG ATGGCACTAT TCGCGGTGAT AACACCGACG GCTTAGGGCT GGTGGCCGAT CTCATCGCTA ACTTAGGTAG CTTGCAAGAT CAGCGCGTGT TACTCATTGG CGCTGGTGGC GCGGCGCGCG GTTGTATTCT GCCGTTATTA AATGCGGGAA TTGCGCAGCT GACCATCAGC AATCGCACCC ACACAAAGGC GCAGCTTTTG GTCGATATCT TTACTTCTGT GGATAACGGC GCTTACGTGA GTAAAGTCAC CGCCGTAGAA ATGAGTGAGC TTGCGGGCGA GTTCGATATC ATCATCAATT CAACCTCGGC TAGCCTTGCG GGCGAGTTGC CACCTTTGCC AGCACATATC ATCACCACCC AAACCGTTTG TTATGACATG ATGTATGGCG CCTCGGTCAC CGCGTTTAAC CAATGGGCAC TCTCCCAAGG TGCTGCGAAA GTCATTGATG GGCTAGGTAT GTTAGTCGGA CAAGCGGCTA AGAGTTTTAC CTTATGGCGA GGTATTGAGC CCGACACCCA AGTGGTGTTG ACGCTTTTGC GGGACAAACT AATGGCAGAG CCTAAGTAG
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Protein sequence | MTDRYAVFGN PISHSKSPFI HGQFAAPTQE SLTYEAILAP VDGFEASLTA FFNAGGKGAN VTVPFKEQAF ALCDSISPEA KLAGAVNTLS LLADGTIRGD NTDGLGLVAD LIANLGSLQD QRVLLIGAGG AARGCILPLL NAGIAQLTIS NRTHTKAQLL VDIFTSVDNG AYVSKVTAVE MSELAGEFDI IINSTSASLA GELPPLPAHI ITTQTVCYDM MYGASVTAFN QWALSQGAAK VIDGLGMLVG QAAKSFTLWR GIEPDTQVVL TLLRDKLMAE PK
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