Gene Shew185_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0029 
Symbol 
ID5369521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp35553 
End bp36569 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content48% 
IMG OID640828214 
ProductDNA protecting protein DprA 
Protein accessionYP_001364265 
Protein GI152998584 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGG ACGACCTCAG GCAAAGGTTA GAGCACGAGA GAGAAGCGCT ACCTTTATCT 
GACCATCTGC TCCATAGTCT TGCTATTGAT TATCAAAAAG TCGATGTCGC CCTCGAATGG
CAGCAGCAAG CCGCTGACCA TCATCTCGTT TGTTTCTCCG ATCCGCTTTA TCCGCCGTTA
TTAAAACAAC TCTCAGATCC GCCCGCCGTC CTGTTCGTTA AAGGTTGTTT GGAGGCGTTA
GCCCTTCCTT ATCTTGCAAT TGTTGGCAGT CGTAATGCTT CACCAGGCGG ATTGCAGGTC
GCTTATCAGC TGGCTGTGGA GATGTGCTCA ATGGGATTTG GTATCTGCAG CGGTATGGCG
ATGGGGATTG ATGGCGCTGC CCATAAAGCC TGTGTTGAAC ATCAAGGGCG AACCGTTGCT
GTGCTTGGGA CTGGCATTGA GACTGTTTAT CCACGAAAAC ATCGGCAGCT TTATCATGAT
ATTCAGCAGC AAGGCTGTAT ACTTAGCGAG TTTTGGCCAG ATGTCGGTCC CTTTGCGGGG
AATTTCCCGA AACGAAATCG GATTATTAGC GGTCTTTCTT TAGGGACACT TGTGGTTGAA
GCCTGTCGTA AAAGCGGTTC TTTAATCACA GCTAGGTTGG CGATGGAGCA AGGGCGTGAG
GTGTTTGCCG TTCCGGGCTC AATCTTGGGC GGTTACCATC AAGGCTGTCA TGATTTATTA
CGTGATGGGG CAAAACTTGT GGAAACAGCC GCCGATATAG TGGAGGAGTT GGCAAGTTTA
ACCGCTTACC ACCTTGAAGA ATTGAAGTTA TGCCACCATA TACAGCAAGG CGAGATTTGT
AATTTGCCAT TTTCGTCTCT GTTAGCTAGT GTAGGTTATG AAACTACATC CATTGATGCA
GTAGTTGAAC ATAGTGGGAA AACGATAGAT CTGGTGTTAG AACAAATGCT TGAACTTGAG
TTGCAAGGTT GGGTGATTGC AGTACCCGGT GGTTACGTCA GAGTAAAGAG GAGCTAG
 
Protein sequence
MEVDDLRQRL EHEREALPLS DHLLHSLAID YQKVDVALEW QQQAADHHLV CFSDPLYPPL 
LKQLSDPPAV LFVKGCLEAL ALPYLAIVGS RNASPGGLQV AYQLAVEMCS MGFGICSGMA
MGIDGAAHKA CVEHQGRTVA VLGTGIETVY PRKHRQLYHD IQQQGCILSE FWPDVGPFAG
NFPKRNRIIS GLSLGTLVVE ACRKSGSLIT ARLAMEQGRE VFAVPGSILG GYHQGCHDLL
RDGAKLVETA ADIVEELASL TAYHLEELKL CHHIQQGEIC NLPFSSLLAS VGYETTSIDA
VVEHSGKTID LVLEQMLELE LQGWVIAVPG GYVRVKRS