Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0020 |
Symbol | |
ID | 5371985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 26841 |
End bp | 27365 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640828205 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_001364256 |
Protein GI | 152998575 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000993803 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACGT TAATAATCTA TTCGACGATT GATGGCCAAA CATTGGCAAT TTGCCAAAAA ATGAAGACGA TTGCAGAGCA GGCGGGAGAA CAGGTTTCGC TGGTCACATT AGAGCAGGCT GATGCGTTGA GCTTAGCGGA TTTTGATAAA GTGCTGATCG GCGCCAGTAT TCGTTATGGT AAGCATAGAC CTGAACTTTA CCAGTTTGTG AACCGCCACC ATGCGGTGCT CGATACTAAG ATTAATGGCT TTTTTACCGT TAATGTCGTG GCGCGCAAAC CCTTAAAGAA TACGCCTGAA ACCAATCCTT ATATGCAAAA GTTTCTGCAG CTTTCACTGT GGCAACCTCA GCAGTTAGAA GTGTTTGCGG GCAAGATTGA TTATCCTAAA TACGGTTTCT TCGATCGCAC TATGATACGT TTCATCATGT GGATGACTAA AGGGCCAACC GATATCACAG GCACCTTTGA GTTTACCGAT TGGGAAAAAG TCGACGCCTT CGGTAACCGC TTTAGCCAGC ACTAA
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Protein sequence | MQTLIIYSTI DGQTLAICQK MKTIAEQAGE QVSLVTLEQA DALSLADFDK VLIGASIRYG KHRPELYQFV NRHHAVLDTK INGFFTVNVV ARKPLKNTPE TNPYMQKFLQ LSLWQPQQLE VFAGKIDYPK YGFFDRTMIR FIMWMTKGPT DITGTFEFTD WEKVDAFGNR FSQH
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