Gene Shew185_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0018 
Symbol 
ID5372579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp24689 
End bp25303 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID640828203 
Producthypothetical protein 
Protein accessionYP_001364254 
Protein GI152998573 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.919089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGAAA GTTATAGCGT TCCCTGTGCA GATATCGTGA TTGAAGAAGA GATAAAGCAT 
AGCCGCTTTA TCTCTTTTCT GTTTCATTGC GATAGCTTTG ATAAATTTAA GTTAGTACTC 
ACTGACATAA AGCGTGACTA TCCCGGCGCA AGCCATTATT GCTCTGCTTT TGTGGCTGGC 
GCACCGGATG ATAGCGTCTT GATTGGTTCG AGTGATGACG GCGAACCTGC CGGCAGTGCT 
GGTCGCCCTA TGTTAGCTGT GTTGCAAGGG GCGAATATCG GCGAAGTGGG TGCTGTTGTG 
GTGCGTTATT ATGGCGGTAC TAAGCTAGGC GTAGGTGGAC TGGTTCGGGC TTATACGTCG 
GGCTTAAGGC AAGGTTTGGT TCAATTGCCG ACGCGACTAA AACAGTTACG TTATCCCGCC 
AAGTTGCATT GTGATTATGC GCAGCTGCGC GATGTGGAAC ATCTATTACA GCAAGTCGAT 
GCCGTGATTA TCGACAAGCA ATTTGCCGAA GCGGTCGATA TTGTGTTCGA GATAGGCAGG 
CAGCAACAGA CATTACTGTG TGAGTCGCTG GCGACACTCA GTCAGGGAAG TTTGAGGCCT 
GAGTTTGAGC TGTGA
 
Protein sequence
MLESYSVPCA DIVIEEEIKH SRFISFLFHC DSFDKFKLVL TDIKRDYPGA SHYCSAFVAG 
APDDSVLIGS SDDGEPAGSA GRPMLAVLQG ANIGEVGAVV VRYYGGTKLG VGGLVRAYTS 
GLRQGLVQLP TRLKQLRYPA KLHCDYAQLR DVEHLLQQVD AVIIDKQFAE AVDIVFEIGR 
QQQTLLCESL ATLSQGSLRP EFEL