Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0016 |
Symbol | fadB |
ID | 5372577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 20698 |
End bp | 22848 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828201 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_001364252 |
Protein GI | 152998571 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.283529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAGGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGACAGAG AAACCCTCGC CTCGCTCGAT GCGGCATTAG ACAGCATCAA GCAAGATTCC AATATCAAAG CGTTAGTGCT GACCTCAAGT AAAGATACCT TTATTGTGGG CGCCGACATT ACCGAATTTT TAGGCCTGTT CGCACAAGAT GACGCCGTAT TGCTCTCTTG GGTTGAACAA GCTAACGCAG TCTTCAACAA ACTCGAAGAC TTGCCTTTCC CAACTGCATC AGCAATCAAA GGCTTTGCCT TAGGTGGCGG CTGTGAAACC ATTCTGGCAA CCGATTTCCG TATCGCAGAC ACCACAGCCA AAATCGGTTT ACCTGAAACT AAACTCGGCA TCATCCCAGG TTTTGGCGGC ACAGTTCGTC TGCCACGTGT GATTGGTGCA GATAACGCAC TTGAGTGGAT CACGACCGGT AAAGACCAAC GCGCTGAAGA TGCACTGAAA GTCGGCGCTG TTGATTCCGT GGTTGCACCA CAAGCGTTAG AAGCTGCTGC GATTCAAATG CTGAAAGATG CTGTTGCTGA AAAGCTGGAT TGGCAAGCAC GTCGTAACCG TAAACTGTCT GCGCTAACAC TGCCAAAACT TGAAGCTATG ATGTCATTCA CCACAGCCAA AGGCATGGTG TTTGCGGTTG CGGGTAAACA CTACCCTGCA CCAATGGCTG CTGTAAGCGT AATTGAGCAA GCATCGACTA AAGGTCGTGC TGAAGCATTA CAAATCGAAC ATCAAGCCTT TATCAAGCTG GCTAAAACTG ACGTAGCTAA AGCACTTATC GGTATTTTCC TTAATGATCA ATTTGTTAAA GGTAAAGCGA AGAAAGCCGG CAAGTTAGCG AAAGAAGTCA ACAACGCGGC CGTATTAGGC GCAGGCATTA TGGGCGGCGG CATCGCTTAC CAAAGCGCCA GCAAAGGCAC ACCGATTGTC ATGAAAGACA TTGCCCAGCC AGCATTAGAT TTAGGCCTCA ATGAAGCCGC TAAACTGCTA TCTGCCCAAG TCGCCCGTGG CCGTTCAACG CCAGAAAAAA TGGCCAAAGT GCTGAACAAC ATCACGCCTT CATTAGATTA TGCCGCGATT AAACACAGTG ATGTCGTCGT TGAAGCCGTT GTTGAACATC CAAAAATCAA AGCACAGGTT TTAGCCGAAG TTGAAGGCTA TGTGAGTGAA GATGCAATTA TCGCGTCAAA CACTTCAACG ATTTCAATCA ACTTGCTCGC TAAGAGCATG AAGAAACCTG AACGTTTCTG CGGTATGCAT TTCTTCAACC CAGTGCACAA AATGCCTTTG GTCGAAGTTA TCCGTGGCGA GCATAGCTCT GAAGAAACCA TCGCCTCTGT TGTGGCTTAT GCCAGCAAAA TGGGCAAGAC CCCAATCGTT GTTAATGATT GCCCTGGCTT CTTCGTTAAC CGCGTACTCT TCCCTTACTT TGCAGGCTTT AACGGCTTAC TTGCCGAAGG TGGCGACTTT GCTGCAATCG ACAAAGTGAT GGAAAAACAA TTCGGTTGGC CAATGGGTCC AGCTTACCTG CTCGACGTAG TCGGTTTAGA CACAGGTCAT CACGCCCAAG CTGTTATGGC TGAAGGTTTC CCTGATCGCA TGGGTAAATC AGGCACTGAC GCGATTGATG TGATGTTTGA GAACAAACGT CTTGGCCAGA AAAATGGTAA AGGTTTCTAT GTCTATTCAG TCGATAGCCG TGGCAAGCCG AAGAAAGATG TCGATCCAAC GAGCTACGGC CTATTGAAAG ATGCCTTTGG CGAGTTAAAA GCCTTTGAAG CCGATGACAT TATTGCCCGT ACTATGATCC CTATGATCAT CGAAACCGTG CGCTGTTTAG AAGAAGGTAT TGTCGCATCG CCTGCCGAAG CGGATATGGG CCTAGTTTAT GGCTTAGGTT TCCCGCCATT CAGAGGCGGC GTGTTCCGTT ACTTGGATAC CATGGGTGTC GCAAATTTTG TGGCCTTAGC AGACAAATAT GCTCACTTGG GCGGTCTGTA TCAAGTCACA GATGCGATGC GCACATTAGC AGCCAATAAC GGTAGCTACT ACCAAGCCTA A
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Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLASLD AALDSIKQDS NIKALVLTSS KDTFIVGADI TEFLGLFAQD DAVLLSWVEQ ANAVFNKLED LPFPTASAIK GFALGGGCET ILATDFRIAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITTG KDQRAEDALK VGAVDSVVAP QALEAAAIQM LKDAVAEKLD WQARRNRKLS ALTLPKLEAM MSFTTAKGMV FAVAGKHYPA PMAAVSVIEQ ASTKGRAEAL QIEHQAFIKL AKTDVAKALI GIFLNDQFVK GKAKKAGKLA KEVNNAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLNEAAKLL SAQVARGRST PEKMAKVLNN ITPSLDYAAI KHSDVVVEAV VEHPKIKAQV LAEVEGYVSE DAIIASNTST ISINLLAKSM KKPERFCGMH FFNPVHKMPL VEVIRGEHSS EETIASVVAY ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL LDVVGLDTGH HAQAVMAEGF PDRMGKSGTD AIDVMFENKR LGQKNGKGFY VYSVDSRGKP KKDVDPTSYG LLKDAFGELK AFEADDIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRTLAANN GSYYQA
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