Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0002 |
Symbol | |
ID | 5372990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1790 |
End bp | 2890 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640828187 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001364238 |
Protein GI | 152998557 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000103765 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCT CAATTGATAG GGATGCCCTA TTAAAGCCGT TGCAATTGGT GTGTGGTGCG GTAGAAAGAC GCCATAATTT GCCCATTTTG TCTAACCTCC TTGTAGAAGT AAGTGGTCAC TCACTTAAGC TGACCGGAAC CGATTTAGAA GTCGAACTTG TGGGCCAAGT TGTGGTTCAC GGTGATATCG AAGAAGGTCG TACTACGGTT CCGGCTAAAA AGCTGCTCGA TATTGTTAAG TCTTTGCCAG AACAAAGCGA ACTGAAAGTC GAACAACAAG ATAATAAATG GTTGCTGCGT TCAGGCCGTA GCCGTTTTTC ATTAGCGACG TTGCCCGCAG AAGAATATCC CAACGTTGAA GCCTTCCAAG CTGAGATTGA ATTTAGCTTG AAGCAGGGTG TGTTGAAGTC GATTATCGAC TCAACGCAAT TTTCTATGGC TAACCAAGAT GTGCGTTATT ACCTCAACGG TTTATTGTTT GAAACTGAAG GTAATGTGTT GCGCGCGATT GCGACCGACG GCCACCGTTT GGCCTTAAGT CACCGCACAA TTGAAGCGCA ATTACCTGAA AAACAAGTCA TTGTTCCACG CAAAGGCGTA ATGGAAATGG CGCGTTTATT GGAGTCGGAC GATCTCGATA TCGCGATTGC CATTGGTGAT AATGCCATTC GTGCTACTAC GGCTAACACT GTATTTACCA GTAAATTAGT CGATGGCCGC TTCCCTGATT ATCGCCGTGT ATTGCCAAAG GGCGGTGATA AAATTGTGAT TGCGAGTCGT AATCACCTGA AGCAAGCGCT GACCCGCGCA TCGATTTTAT CGAACGAAAA ATTCCGTGGT GTGCGTATTC AACTCGAAAA TGGTCTGCTT AAGATCACCG CTAACAATCC TGAACAGGAA GAAGCGGAAG AGATCATCGA TGTGGAATAC AACAACCAAG CCTTAGAAAT TGGTTTTAAC GTCAGTTATT TACTCGACGT GCTCAACAAC CTTAAGTCCG ATGATGTGCG TATCACGCTC ATTGATGGTA ACTCCAGCGC CTTAATCGAA AACCATTTGG AAGAAGATTC CATGTATGTG GTTATGCCGA TGCGCTTATA A
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Protein sequence | MKFSIDRDAL LKPLQLVCGA VERRHNLPIL SNLLVEVSGH SLKLTGTDLE VELVGQVVVH GDIEEGRTTV PAKKLLDIVK SLPEQSELKV EQQDNKWLLR SGRSRFSLAT LPAEEYPNVE AFQAEIEFSL KQGVLKSIID STQFSMANQD VRYYLNGLLF ETEGNVLRAI ATDGHRLALS HRTIEAQLPE KQVIVPRKGV MEMARLLESD DLDIAIAIGD NAIRATTANT VFTSKLVDGR FPDYRRVLPK GGDKIVIASR NHLKQALTRA SILSNEKFRG VRIQLENGLL KITANNPEQE EAEEIIDVEY NNQALEIGFN VSYLLDVLNN LKSDDVRITL IDGNSSALIE NHLEEDSMYV VMPMRL
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