| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4487 |
|---|
| Symbol | |
|---|
| ID | 5334924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 2345789 |
|---|
| End bp | 2347612 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001364210 |
|---|
| Protein GI | 152968426 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0324743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0684867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTGC GCGAAGTCCC CCGCACCGCG GGTGAGGACC CCGGGACCCC GCCGCCCCGC
CGCGAGGAGG TCCGCCGCGT CCTGCGGCTG TTCCGCCCCC ACACCCGCCC GCTGGGCCTC
GTCGGCGTCC TCATCGCCCT CTCCGCCGTC GCCGGCGTCG CGTCCCCGTT CCTCATCCGC
GAGGTCGTCG ACGTCGCCCT GCCCCGCGGC GACCTGCGCC TCCTGGCGTG GCTGGCCGCC
GGGCTCATCG GCATCGTCGT CGCCACCACC GCCCTCGACG TCCTCCAGAG CCTGCTCACC
ACCCGCGTCG GGCAGGCCGT CATGCACGGC CTGCGCACGG CGCTGTACTC CCACCTGCAG
CGCATGTCGC TGGGGTTCTT CGCCCGCACC CGCACCGGCG AGGTCCAGTC CCGCATCGCC
AACGACATCG GCGCCCTGCA GACCGTCGTC ACCTCCACCG GCGCCGACCT CGTCCAGAAC
CTCGCCACCG TCGTCGTCAC CGTCGTGGCG ATGCTGGCCC TGGACTGGCG CCTGGCCCTG
TTCTCCTTCG TCGTCCTGCC GTTCTCGGTG TGGCTCAACC GCCGCGTCGG GCGGCTGCGG
CGGCGCATCA CCGCCCAGCG CCAGCGCCAG CTCGCCGAGA TGTCCGCCAC CGTCGAGGAG
ACCCTCTCGA TCTCGGGGAT CCTGCTCACC CGCACCACCG GGCGCACCCC CGAGGTCGTC
GAGCGCTTCA CCCGCCAGTC CGACGATGTC GCCCGCCTGG AGGTCGGCTC CGAGATGGCC
GGGCGCTGGC AGTGGTCGCT CATCACGCTG ACCATGGCCG CCGTCCCCGC CCTGACCTAC
CTGCTCGGCG GGTGGATCCG CGGCACCGGG ACCGCGCTGA GCATCGGCAC CCTCGTCGCG
CTGGTGACCC TGCAGGCCCA GCTGTTCCGG CCCCTGGGCG CGCTGCTGCG CATCGTCGTG
CGCCTGCACG CCTCGATGGC CCTCTTCACC CGCGTCTTCG AGTACCTCGA CACCCCCGTC
GAGGTCGCCG AGCGCCCCGG CGCCGTGGAC CTGCCCCGCC CCCGCGGCCA CGTCCGCTTC
GCCGGGGTCT CCTTCGCCTA CCCCGGGGCC GGGCAGGACA CCCTGACGGG GATCGACCTC
GACGTGCCCG CCGGCACCTC GCTGGCCGTC GTCGGGACGA CCGGCTCGGG CAAGACGACC
CTGGGCTACC TGCTGGCCCG CCTGTACGAC GTCGACTCCG GCGCGGTGCT GCTCGACGGC
CACGACGTGC GCGACCTCAC CGCGCGCTCG CTGTCCGACG CCGTCGGCGT CGTCACCCAG
GAGACGTTCC TGCTGCACGC CAGCGTCGCG GACAACCTGC GCTTCGCGAA GCCGGACGCG
ACCGACGAGG AGCTGCGCCG GGCCGCGCGC GCCGCCCAGG TCGACGACGT CCTCAGCGCC
CTGCCGCAGG GCTACGACAC CGTGGTGGGC GAGCGCGGCT ACCGGTTCTC CGGCGGTGAG
AAGCAGCGGA TCGCGCTGGC CCGCACGGTG CTGCGCGACC CCCCGGTCCT GCTGCTCGAC
GAGGCGACCT CGGCCCTGGA CACCCGCACC GAGCGGGCCA TGGCCGCGGC GCTGGCGGAG
CTGTCCAGCG GGCGGACCAC CGTCACCATC GCCCACCGGC TCTCCACCGT GCGCGACGCG
GACCAGATCG TGGTCCTCGA CCGCGGCCGG GTCGCCGAGG TCGGCACCCA CGCGGAGCTG
CTGGCCCGCG GGGGCCGCTA CGCCGGGCTC GTCGCCGCCG ACGCGGCGCG CGCCGAGCCG
CTGGAGCAGC CCGCGGGGTC GTAG
|
|---|
| Protein sequence | MPVREVPRTA GEDPGTPPPR REEVRRVLRL FRPHTRPLGL VGVLIALSAV AGVASPFLIR
EVVDVALPRG DLRLLAWLAA GLIGIVVATT ALDVLQSLLT TRVGQAVMHG LRTALYSHLQ
RMSLGFFART RTGEVQSRIA NDIGALQTVV TSTGADLVQN LATVVVTVVA MLALDWRLAL
FSFVVLPFSV WLNRRVGRLR RRITAQRQRQ LAEMSATVEE TLSISGILLT RTTGRTPEVV
ERFTRQSDDV ARLEVGSEMA GRWQWSLITL TMAAVPALTY LLGGWIRGTG TALSIGTLVA
LVTLQAQLFR PLGALLRIVV RLHASMALFT RVFEYLDTPV EVAERPGAVD LPRPRGHVRF
AGVSFAYPGA GQDTLTGIDL DVPAGTSLAV VGTTGSGKTT LGYLLARLYD VDSGAVLLDG
HDVRDLTARS LSDAVGVVTQ ETFLLHASVA DNLRFAKPDA TDEELRRAAR AAQVDDVLSA
LPQGYDTVVG ERGYRFSGGE KQRIALARTV LRDPPVLLLD EATSALDTRT ERAMAAALAE
LSSGRTTVTI AHRLSTVRDA DQIVVLDRGR VAEVGTHAEL LARGGRYAGL VAADAARAEP
LEQPAGS
|
|---|
| |