| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4333 |
|---|
| Symbol | |
|---|
| ID | 5336482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2540166 |
|---|
| End bp | 2542877 |
|---|
| Gene Length | 2712 bp |
|---|
| Protein Length | 903 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_001364060 |
|---|
| Protein GI | 152968276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00796105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.47145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGT ACGACGAACC CCCCGCTGAC TTCGACGCCC CCGACGACGG GCCCTCCCGG
GGCCGGCGCG GCGGCCGCAA GGACCGCGGC GCGGACGGCG GCGGTGCCTC CTTCGACCGC
ATGCCCCCCC AGGACATCGC CGCCGAGCAG GGCGTCCTCG GCGGGATGAT GCTGTCCAAG
GACGCCATCG CCGACGTCGT CGAGGTCCTC AAGGGCAACG ACTTCTACCG CCCCGCCCAC
GAGCTCGTCT ACGAGGCGAT CCTCGACCTC TACTCCCGCG GCGAACCCGC CGACCCGGTC
ACCGTCTCCG CGGAGCTCAC CAACAAGGGC GAGCTCACCC GCATCGGCGG CACCCCCTAC
CTGCACGACC TCATCTCCAC CGTCCCCACC GCGGCCAACG CCGCCTTCTA CGCCCGCATC
GTCCGCGAGC GCGCCGTCCT GCGCCGCCTC GTCGAAGCCG GCACCCGCAT CGTGCAGATG
GGCTACGGCG CCGACGGCAT GGACGTCGAC GCCATCGTCA ACTCCGCCCA GGCCGAGGTC
TACGCCGTCA CCGAGACCCG CACCAAGGAG GACTACGCCG TCCTCGGCGA CGTCATCGAG
GGCACCATCG ACGAGATCGA GGCCAGCTCC CACCGCGGGG AGGGCATGGT CGGGGTCCCC
ACCGGCTTCG CCGACCTCGA CAGCCTCACC AACGGCCTGC ACCCCGGGCA GATGATCGTC
ATCGCGGCGA GGCCGGCTGT GGGGAAAAGC ACCCTGGGAC TAGACATCGC GCGCGCCGCG
TCCATCAAGC ACGGTCTCGC GTCGGTGATC TTCTCCCTGG AGATGGGGCG CAACGAGATC
GCGATGCGCC TGCTCTCCGC CGAAGCGCGC GTGCCCCTGC AGAAGATGCG CAAGGGCAAC
ATGGACGACG CGGACTGGAC GCGCTTCGCG CGCACCATGG GCGCCATCAA CGAGGCGCCG
CTCTACATCG ACGACTCCCC GAACATGTCG CTGATGGAGA TCCGCTCCAA GTGCCGGCGG
CTGAAGCAGC GCGCCGACCT GAAGCTCGTC ATCGTCGATT ACCTCCAGCT CATGACGTCG
GGCAAGCGCG TCGAGAGCCG CCAGCAGGAG GTCTCGGAGT TCTCCCGCGC CCTGAAGCTG
CTGGCGAAGG AGATCGAGGT CCCGGTCATC GCGCTCTCGC AGCTGAACCG CGGTCCCGAG
CAGCGCACGG ACAAGCGGCC CATGGTCAGC GACCTGCGCG AATCGGGCTG CCTCACCGCC
GGGACCCGCG TGCTGCGGGC CGACACCGGT GCGGAGACCA CGATGGGGGA GCTGTTCGCC
CTCCAGGCCC GTGACGTGCC CGTCTGGTCG CTGGACGAGT CGCTGCGCTA CGTCCGTCGC
CACCTGACCC GCGTGTTCCC GACCGGGGTG AAGCCGGTGT TCCGGCTGCG GACGGCCTCG
GGCAAGACGG TCCGGGCGAC CGCGAACCAC CCCTTCTTGA CCTACGACGG GTGGAAGCCG
CTGGGCGAGC TCTCCGTGGC CGACCGCCTC GCCGTCCCCC GCCACGTCCC GGCCCCGGAG
CGCGTGGCGA GCTGGACCGA CGACCAGGTG CTGCTGCTGG GCCACCTCAT CGGCGACGGG
TCGTTCGTGA AGCGCCAGCC CCTGCGCTAC GCCAGCGTGG ACGAGGCGAA CCTGTCCGCC
GTCACCGAGG CCGCCGCCAA CGCGTTCTCC ATCGTCGCCG TCCGCGACGA GTACGCCGCC
GCGCGGTGCA CCACCCTGCG CCTGCCCGCG CCCTACCGCC TGACCCACGG GCGCCGGAAC
CCGCTGGCCG CGTGGCTCGA CGAGCTGGGG CTGTTCGGTC TGCGCAGCTA CGAGAAGTTC
GTGCCCCAGG AGGTCTTCCA CCTCCCCAAG CGCCAGATCG CGTTGTTCCT GCGCCACCTG
TGGGCGACGG ACGGCAGCGT CACCCTGACC CGGCAGAGCC GCGGCGGCCG GATCTACTAC
GCCTCCACCA GCCTCCAGCT GATCCAGGAC GTCTCCCGGT TGCTCCTGCG CTTCGGCATC
TCGACCCGGG TCCGCACCAC CACTCCGAAG GGCGACCACC GCCCCGGCTA CACGCTGGAC
GTCTCGGGAG TAGACGACCA GCGCCGCTTC CTCCAGGAGA TCGGTGTGCA CGGCGCCCGC
GGGGCCACGG CCGACCGGTT GCTGGAGGTC ATCCGCGACG TGTCGGCGAA CACCAACGTC
GACACCGTGC CGCGCCAGGT GTGGGACGAC GTCCGCCGCC TGCTCGTCGA GAAGGAGATG
ACGCACCGCG AGTTCGCCGC CGCGATGGGC ACGTCCTTCG GAGGGAGCTC GCTGTGGAAG
CACGCGCCGT CGCGGGAACG GCTGGGGCGC GTGGCCCAGG TCCTCGACAG CGCCGAGCTG
GACGTGCTGG CGGTGAACGA CGTCCTGTGG GACGAGGTCG TCGCCATCGA GCCCGACGGC
GAGGAGCAGG TCTACGACGC GACCGTGCTC GGCGGCCACA ACTTCGTCGC CGACGGCATC
GCCGTCCACA ACTCCATCGA ACAGGACGCC GACATGGTGA TCCTGCTCCA CCGCGAGGAC
ATGTACGAGA AGGAGTCCCC GCGGGCGGGG GAGGCGGACT TCATCGTCGC GAAGCACCGC
AACGGCCCCA CGGACACCAT CACCGTCGCG TTCCAGGGGC ACTACTCGCG CTTCGTCGAC
ATGGCGACCT GA
|
|---|
| Protein sequence | MTAYDEPPAD FDAPDDGPSR GRRGGRKDRG ADGGGASFDR MPPQDIAAEQ GVLGGMMLSK
DAIADVVEVL KGNDFYRPAH ELVYEAILDL YSRGEPADPV TVSAELTNKG ELTRIGGTPY
LHDLISTVPT AANAAFYARI VRERAVLRRL VEAGTRIVQM GYGADGMDVD AIVNSAQAEV
YAVTETRTKE DYAVLGDVIE GTIDEIEASS HRGEGMVGVP TGFADLDSLT NGLHPGQMIV
IAARPAVGKS TLGLDIARAA SIKHGLASVI FSLEMGRNEI AMRLLSAEAR VPLQKMRKGN
MDDADWTRFA RTMGAINEAP LYIDDSPNMS LMEIRSKCRR LKQRADLKLV IVDYLQLMTS
GKRVESRQQE VSEFSRALKL LAKEIEVPVI ALSQLNRGPE QRTDKRPMVS DLRESGCLTA
GTRVLRADTG AETTMGELFA LQARDVPVWS LDESLRYVRR HLTRVFPTGV KPVFRLRTAS
GKTVRATANH PFLTYDGWKP LGELSVADRL AVPRHVPAPE RVASWTDDQV LLLGHLIGDG
SFVKRQPLRY ASVDEANLSA VTEAAANAFS IVAVRDEYAA ARCTTLRLPA PYRLTHGRRN
PLAAWLDELG LFGLRSYEKF VPQEVFHLPK RQIALFLRHL WATDGSVTLT RQSRGGRIYY
ASTSLQLIQD VSRLLLRFGI STRVRTTTPK GDHRPGYTLD VSGVDDQRRF LQEIGVHGAR
GATADRLLEV IRDVSANTNV DTVPRQVWDD VRRLLVEKEM THREFAAAMG TSFGGSSLWK
HAPSRERLGR VAQVLDSAEL DVLAVNDVLW DEVVAIEPDG EEQVYDATVL GGHNFVADGI
AVHNSIEQDA DMVILLHRED MYEKESPRAG EADFIVAKHR NGPTDTITVA FQGHYSRFVD
MAT
|
|---|
| |