| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4316 |
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| Symbol | ligB |
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| ID | 5336581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | - |
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| Start bp | 2560587 |
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| End bp | 2562098 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001364043 |
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| Protein GI | 152968259 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.375111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.488131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTCG CCGACGTCGT CGCCACCTCC ACCGCCGTCG CCGCGACCCG CTCGCGCACG
GCCAAGGTCG CGGCCATCGC CGGGCTGCTG CGGGGACTGG ACCCGGCCGA CGCCGAGCTG
ACCGCCGTCG TGGCCGCCTA CCTCGGCGGC AGCCTGCGCC AGCGCCGCAC CGGGCTCGGC
GGGCGCAGCC TCAGCGGCCT GCCCGCCCCG GCCGGCGAGG CGTCGCTGGA GGTCGCGGAG
GTCGACCGCC GCTTCGAGGA GGTCGCGGCC CTGTCCGGCC CGGGGTCGGC CGGGCGCCGC
GCCGCCGCGG TCGCCGACCT CTTCGCCCGG GCCACCGGCG AGGAGCAGCG CTGGCTGCGC
GGGGTCGTCG CGGGCGAGCT GCGCCAGGGC GCGCTGGACG CGCTGGTCCA GGACGCGGCC
GCGGCCGTCG CCGGGGTCCC CGGCCCCGAC GTGCGGCGGG CGGCGATGCT CGCCGGGTCG
ACGGTGCAGG CCGTGGTCGC CGCGCTGCGC GGGGGCGCCG CGGAGCTCGC GGGCTTCGGG
CTGCACGTCG GCCGCCCGCT GCTGCCGATG CTCGCCGCCA GCACCACCTC CGTCGCGGAG
GCCGTCGCCG GGTTCGCGGG CCCGGTGGCC GTGGACACCA AGCTCGACGG GATCCGCATC
CAGGTCCACC GCGGGCCGGA GGGCGTCCGG ATCGCGACCC GGACCCTGGA GGACATCACC
GCTCGGCTGC CCGAGGTCGT CGAGGTGGTG CGGGAACTGC CCGCCCGCGC GTTCGTGCTG
GACGGCGAGG CCCTCGTCCT CGACGGGTCC GGACGCCCGA AGGCGTTCCA GGACACCGCT
TCGCGCACGG CGCAGGCGAG CGGTGACGCG GTGGTGCCGT ACTTCTTCGA CGTCCTGCAC
CTCGACGGCG CGGACCTGCT CGACGTCGCG CTGCGCGAGC GCCTCGCCGC CCTCGACGGG
TTCGTCCCGC CCCGGTGGCG GACCCCTCGC CTGGTCACCG CGGACCCCGC GGCCGCGGCG
GAGTTCGCCG CGCAGGCGCT GGCGGGCGGC CACGAGGGCG TCGTCGTCAA GGACCTCGAC
TCCCCCTACG CGGCCGGCCG GCGCGGCGGG GCGTGGGTGA AGGTGAAACC CGTGCACACC
CTCGACCTGG TCGTCCTGGC CGTGGAACGG GGTTCGGGAC GGCGGGCGGG CTGGCTGTCG
AACGTCCACC TGGGCGCCCG CGACCCCGCG ACGGGGGGTT TCGTCATGCT GGGCAAGACG
TTCAAGGGCA TGACCGACGA GACGCTGGCC TGGCAGACCG CGCGGTTCCG CGAGCTGCAG
ACCGGCGAGG ACGGGTACGT GGTGACGGTG CGCCCGGAGC AGGTCGTGGA GGTCGCCTTC
GACGGCCTGC AGCGCTCGAC CCGCTACCCG GGCGGGGTGG CGCTGCGCTT CGCCCGCGTC
GTGCGCTACC GCGAGGACAA GACCGCGGCC GAGGCCGACA CCCTGGAGAC GGTGCTGGCC
CTGGCCCGCT GA
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| Protein sequence | MLLADVVATS TAVAATRSRT AKVAAIAGLL RGLDPADAEL TAVVAAYLGG SLRQRRTGLG
GRSLSGLPAP AGEASLEVAE VDRRFEEVAA LSGPGSAGRR AAAVADLFAR ATGEEQRWLR
GVVAGELRQG ALDALVQDAA AAVAGVPGPD VRRAAMLAGS TVQAVVAALR GGAAELAGFG
LHVGRPLLPM LAASTTSVAE AVAGFAGPVA VDTKLDGIRI QVHRGPEGVR IATRTLEDIT
ARLPEVVEVV RELPARAFVL DGEALVLDGS GRPKAFQDTA SRTAQASGDA VVPYFFDVLH
LDGADLLDVA LRERLAALDG FVPPRWRTPR LVTADPAAAA EFAAQALAGG HEGVVVKDLD
SPYAAGRRGG AWVKVKPVHT LDLVVLAVER GSGRRAGWLS NVHLGARDPA TGGFVMLGKT
FKGMTDETLA WQTARFRELQ TGEDGYVVTV RPEQVVEVAF DGLQRSTRYP GGVALRFARV
VRYREDKTAA EADTLETVLA LAR
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