| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4275 |
|---|
| Symbol | |
|---|
| ID | 5335671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2604206 |
|---|
| End bp | 2606221 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | copper resistance D domain protein |
|---|
| Protein accession | YP_001364002 |
|---|
| Protein GI | 152968218 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.978208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.70457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCAC CTACCCGCAC GGCCCGCAGC GCGACCCCCG TCACCGGTGT CCTGCTCACC
TCGGCCGCCG TGCTCCTCGC CGCGCTCGCG GTCCTGCTCA CCGCCCTCGC CCTCGCCGGC
GGGCTCACCC CCTCCGCCTT CGGCGACCCC GGCGCCCTCG TCCGCTACGG GCTGCCCGTC
GCCCGCACCG TCCACGACCT CGCCGCGGCG CTCGCCGTCG GCGGCTTCGC GATCGCGACG
TTCCTGCTGC CGCAGCCCAG CGACGCCTTC ACCCGCGCGG TGCGCGTCGG CGGCGTCGCG
GCCGGGGTCT GGGCGGTGGC CGCGCTGGTC GTCCTGCTGC TCACCGCCGT GGACGTCATC
GGGGCCGCGC CGGGCGGGGC GGGGTTCGGG GCGCAGTTCG CCCAGTTCGC CCAGTCGATC
GACCTCGGGC GCGCCCTGCT CGTCACCACC GTCCTCGCCG CGGTGGCCGC CACCGTGGGG
GCCGCCGCGA CCGGGCCGAC GGGCGCGGCC TGGGGCACCG CCGTCAGCCT GATCGCCCTG
CTCCCGCTGT CGCTGTCCGG GCACGCCTCC GGCTCGGCCT CCCACGAGAC CGCCGTCAGC
TCCCTGGCCA TGCACCTGAT CGGCGTCACC GTCTGGGTGG GCGGGCTCGC CGCGGTGCTG
CTGGTCGCCC CCCTCACCGG CCGCTCCGCC GGCCCCGCCA AGGGCCGGCG CGCGGTCGAC
CTGCCCACCC TCGCCGCGCG CTACTCCACC GTCGCGCTGT GGTGCTTCGC CGCCGTCGCC
CTCTCCGGCG TCCTCAACGC CTCGGTCCGC CTCGGCGGCT GGTCCGGCCT CGCCTCGCCC
TACGGCGCCC TCGTGATCGC CAAGGTCGTC GCCCTCGTCG CCCTCGGGGC CCTCGGGGTG
TGGCACCGGC GCCGCACGAT CCCGCTGCTC GCCGACCGGC CGCGGGCCTT CCTGCGCATC
GCCGCCGGCG AGCTCGTCCT CATGGGGGCC GCCACCGGCC TCGGCGTCGC CCTCAGCCGC
AGCCCCACCC CCGTCCCCGA CGACGACCCC GCCTCCTCGC CCGCCGAGGA CCTCCTCGGC
GAGCCGCTGC CGGGGCCGCT GACGGTGGGG CGCTGGTTCA CCGAGACCAG CCCCGACCTG
CTGTGGCTGA CCATCGGCGG GCTGGTGCTC GTCGGCTACC TCCTCGGCGT CCGGCGCCTG
CGCGCCCGCG GGGACGCCTG GCCGGTGGGC CGGACGGTCT GGTGGGTCCT CGGCTGCCTC
GCGCTGCTCT TCGTCACCAG CGGCGGCCCC GCCGCCTACG GCCGCACCGC CTTCAGCACC
CACATGCTCC AGCACATGCT GCTGACGATG GTGGTGCCGC CGATGCTCGT CCTCGGCGCC
CCGGTCACCC TGGCGCTGCG GGTGCTGCCC GCCCGCCGCG ACCACTCCCG CGGGGCGCGG
GAGTGGCTGC TGGAGGTCGT GCACTCGCGC TACTTCGCCC TCGTCGGCCA CCCGCTCGTC
GCGGCCGCCC TCTTCGCCGG CTCGCTCATC GTCTTCTACT ACTCGCCGCT GTTCGAGCTG
GCCCTGCGCA CCCACGTCGG GCACGAGCTG ATGATGGTCC ACTTCCTCGG CACCGGGTAC
CTCTTCGCCT CGGTGCTCAT CGGCGTCGAC CCCGGCGCGC ACCGCCCGGC GTACCCGCTG
CGCCTCATCC TGCTGCTGGC CACCATGGCC TTCCACGCCT TCTTCGGCGT CGCCCTCATG
CAGGGCACCG CCCTGCTCGC CGCCGACTGG TTCAGCCGCA TCGCCCCCGG CACGGACCTG
CTCGCCGACC AGCAGCGCGG CGGCGACATC GCGTGGGGCA TCGGGGAGGT CCCCACGATC
GTCCTGGTGC TCGGGGTCGC CATCGGCTGG TCCCGCTCGG ACACCCGGGA GAACCGCCGC
CGCGACCGCA AGGCCGCCCG CGACGGCGAC GCCGAGCTCA ACGACTACAA CGCCATGCTG
CAGCGCCTCG CCGACCAGGG GGAGCCCCGC CGCTGA
|
|---|
| Protein sequence | MAAPTRTARS ATPVTGVLLT SAAVLLAALA VLLTALALAG GLTPSAFGDP GALVRYGLPV
ARTVHDLAAA LAVGGFAIAT FLLPQPSDAF TRAVRVGGVA AGVWAVAALV VLLLTAVDVI
GAAPGGAGFG AQFAQFAQSI DLGRALLVTT VLAAVAATVG AAATGPTGAA WGTAVSLIAL
LPLSLSGHAS GSASHETAVS SLAMHLIGVT VWVGGLAAVL LVAPLTGRSA GPAKGRRAVD
LPTLAARYST VALWCFAAVA LSGVLNASVR LGGWSGLASP YGALVIAKVV ALVALGALGV
WHRRRTIPLL ADRPRAFLRI AAGELVLMGA ATGLGVALSR SPTPVPDDDP ASSPAEDLLG
EPLPGPLTVG RWFTETSPDL LWLTIGGLVL VGYLLGVRRL RARGDAWPVG RTVWWVLGCL
ALLFVTSGGP AAYGRTAFST HMLQHMLLTM VVPPMLVLGA PVTLALRVLP ARRDHSRGAR
EWLLEVVHSR YFALVGHPLV AAALFAGSLI VFYYSPLFEL ALRTHVGHEL MMVHFLGTGY
LFASVLIGVD PGAHRPAYPL RLILLLATMA FHAFFGVALM QGTALLAADW FSRIAPGTDL
LADQQRGGDI AWGIGEVPTI VLVLGVAIGW SRSDTRENRR RDRKAARDGD AELNDYNAML
QRLADQGEPR R
|
|---|
| |