| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4265 |
|---|
| Symbol | |
|---|
| ID | 5335696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 2618409 |
|---|
| End bp | 2619920 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | permease for cytosine/purines uracil thiamine allantoin |
|---|
| Protein accession | YP_001363992 |
|---|
| Protein GI | 152968208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.864327 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC CGGAATCCGC CCCGCCCACC CGTCCCCCCG CGCCCGAGCT GCGCGGCGCG
CCCAGCCCGC GCCTGCACAA CGAGGACCTC GCACCCCGCC GCGACGCGGC CCCCTGGCGC
ACCTGGGACC TCTTCTGCTG GTGGATGTCC GCCTGGCACA GCCTCGGCAG CTACACCTTC
GCCATCGGCC TGCTCGTGCT CGGCCTCACC GGCTGGCAGG TCGTCGTGGC CCTCGTCCTC
GGCATCGCCG TCCTGCTGTG GGGGTGCAAC CTCACCGGCG TCGCCGGGCA GCGCGCCGGG
GTCCCCTTCC CCGTCTTCGC CCGGCTCAGC TTCGGGGTCT TCGGGGCCAA CGTGCCCGCC
CTGCTGCGCG CCGTCGTGGG CGTCGCCTGG TACGGCATCC AGACCTACCT CGCCAGCCTG
GCCGTCATGA CGATGACCCT CAAGGTCTGG CCCGCGTCGC AGTCCCTGAC CGCGCCGCAG
TTCCTCGGCA TGTCCGCGCT GGGCTGGATC TGCTTCCTCG TCCTGTGGAC CCTGCAGCTC
GCGGTCCTCC ACCGGGGCAT GGAAGCGGTG CGGAAGCTGT CCGACGTCGC CGGCCCCGTC
CTGTGGATCG CCATCGCCGC CCTCGCCGTG TGGGTCCTCG CCCGCGCCGG CTGGAGCGTG
GACTGGAACT ACCGGGAGGG CCCCGCCCTC GACACCGCCG GCACCGTCAG CGCGATCGTC
TCGGGCGCGT TCCTCACCGT CGCGTTCCTC GCCGGGCCGA TGCTGAACTT CGCCGACTTC
TCCCGCAACT CCCCCGACGC CCGCTCCATC CGCCGCGGCA ACGGCCTCGG CCTGCTCGTC
AACGGCACCG CGTTCGTGCT GGTGTCCGTC GTCATCGCGC TGGCCTCGGC CGAGGTGCAC
GGGCAGGCGG TCACCGACCC CGTCGAGCTC GTCCAGGACA TCGACAGCGT CACGCTGCTG
CTCCTGGCGA CCGTGTCCAT CGCGGGCTCG GCCGTCGGCA TCAACATCAT CCTGAACTTC
GTCTCCCCGG CCTACGACTT CGCCAACGTC GCCCCCTCCC GCATCAGCTT CCGCACCGGC
GGGGTCATCA CCGCCGTCGT CGCCCTCGTC GTCATGCCGT GGCGGCTGTA CTCCAGCCCC
GTCATGGTGA ACTACTTCAT CGGCGGCGTC GGCGCCCTCA TCGGCCCGGT GTTCGGCATC
GTCGTCGCCG ACTACTACCT GCTGCGCCGC GGCCGGATCG ACGTCGACGA CCTGTACTCC
GACTCCCCCA CCGGCCGGTA CTGGTACCGG CGCGGCACGA ACCCCAACGC GATCGCCGCC
CTCCTCGTCG CCGGCACCAT CACCCTGCTC GTCGCGTTCC TGCCGGCCCT CTCCGCCCTC
GCCGCGTACT CCTGGCTGGT GGGCACCGTC ATCGGCGGCG GGGCCTACCT GCTGGCCGAG
CGGGTCCACC CCTCCGGCTC CCTGCTGCCC GAACCCGCCG CGGTCCCCGC GCAGCTCCCC
ACCCAGCGCT GA
|
|---|
| Protein sequence | MSAPESAPPT RPPAPELRGA PSPRLHNEDL APRRDAAPWR TWDLFCWWMS AWHSLGSYTF
AIGLLVLGLT GWQVVVALVL GIAVLLWGCN LTGVAGQRAG VPFPVFARLS FGVFGANVPA
LLRAVVGVAW YGIQTYLASL AVMTMTLKVW PASQSLTAPQ FLGMSALGWI CFLVLWTLQL
AVLHRGMEAV RKLSDVAGPV LWIAIAALAV WVLARAGWSV DWNYREGPAL DTAGTVSAIV
SGAFLTVAFL AGPMLNFADF SRNSPDARSI RRGNGLGLLV NGTAFVLVSV VIALASAEVH
GQAVTDPVEL VQDIDSVTLL LLATVSIAGS AVGINIILNF VSPAYDFANV APSRISFRTG
GVITAVVALV VMPWRLYSSP VMVNYFIGGV GALIGPVFGI VVADYYLLRR GRIDVDDLYS
DSPTGRYWYR RGTNPNAIAA LLVAGTITLL VAFLPALSAL AAYSWLVGTV IGGGAYLLAE
RVHPSGSLLP EPAAVPAQLP TQR
|
|---|
| |