| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4148 |
|---|
| Symbol | |
|---|
| ID | 5335313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2733222 |
|---|
| End bp | 2735180 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1680 |
|---|
| Protein accession | YP_001363875 |
|---|
| Protein GI | 152968091 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.834889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CGACCGCTGG GCCCGACCTG ACCGTCGCCA CCACCGCCAA CGCCCCCGCC
GCCCCCACCG CCGCGGCGGC CGTCGCGCTG CACCCCGTCC CCCTCGGCGC CTCCCGCATC
CGCGGCGGGT TCTGGTTCGA GCGGCAGGAG GCCAACCGGC GCCAGGCCAT CCGCACCGGC
TACGAGAAGC TCGAGACCTC CGGCAACCTG CGCAACCTCC GCATCGCCGC GGGGACGGAG
CAGGGCGAGG CCAAGGGCCC GATCTTCATG GACTCCGACG TCTACAAGTG GCTCGAGGCC
GCCGGCTGGG AGTACGGCCG CGAGGCCGAC GAGGAGGTCC TCGGCTGGAT CCGCGAGGTC
ACCGCCGTCG TCGCGGCCGC GCAGGCCGAG GACGGCTACC TCGACTCCGT CCAGCAGGTC
CGCGGGAAGG GCGAGCGCTA CGTCGACCTG CCCTGGAGCC ACGAGCACTA CTGCGCCGGG
CACCTCTTCC AGGCCGCCGT CGCCGTCCAC CGCAGCACCG GCGAGACCGG CCTGCTCGAC
GTCGCCGTGA AGCTCGCCGA CCACCTCGTC GCCACCTTCG GCCCGGGGAA GGTCGAGGAG
GTCGACGGGC ACCCCGTCGT CGAGATGGGC CTGGTGGAGC TCTACCGCGA GACCGGGACG
CAGGCCTACC TCGACCTCGC CCGCTGGTTC GTCGACGCCC GCGGCACCGG GATCATCGAG
CGCCTGCACG GCAAGGAGCC CACCTACTTC TCCGACCGCG TCCCCGTCCG CGAGCAGACC
TCCCCCGAGG GCCACTCCGT GCGCGCGGTC TACCTCACCG CCGGGGCCGC CGACGTCGCC
GCCGAGACCG CCGACGGCGA CCTGCTGGCC GCCCTGACGC GGCAGTGGGA GGGGATGCTC
GCCTCCAAGA CCTACGTCAC CGGCGGCATC GGCGCCCGCT GGGACTGGGA GCAGTTCGGC
GACCACTACG AGCTCGGCCC CGAGCGCGCC TACGCCGAGA CCTGCGCGGC CATCGGCAGC
GTCCAGTGGA CCTGGCGGAT GCTGCTCGCC ACCGGCGAGG CCCGCTACGC CGACCTCGTC
GAGCGCACCC TCTACAACGC GTTCCTGCCC GGGGTCTCCC TGGCCGGCAC CGAGTACTTC
TACGTCAACG CCCTCCAGCT GCGCCACGGC GCGTTCGCCG AGGAGGAGCG CAGCGTCGCC
CACGGCCGCC GGCCCTGGTT CGACTGCGCC TGCTGCCCGC CCAACATCAT GCGGACCCTC
TCCAGCCTCG ACGCCTACGT CGCCACCAGC TCGGCGACCG ACGGGGTGGC GGGCGTGCAG
GTCCACCAGT TCACGACCGG CACGATCGAG GCCGCCGGGG CGGCGCTGTC GGTGACCACC
GACTACCCCT GGGACGGGAC CGTCCGCGTC GAGGTCACCG CGACCCCGGG CGAGTTCGAG
CTCGCCCTGC GCGTCCCGGC CTGGGCGCAG GGCGCCACCG CGACGGTGGA CGGCGAGGCC
GTCGCGGTCA CCCCGGGGGA GTACCTGCGG GTCCGGCGCG ACTTCGCCGT CGGCGACGTG
GTGGAACTCG TCCTGCCGAT GACCGTCCGC GTCGTCGAGG CCGACCCGCG CGTCGACGCC
GTCCGCGGCT GCGTCGTCGT CGAGCGCGGC CCCCTGGTCT ACGCGGTCGA GCAGACCGAC
CTGCCCGCCG GCCTGCCCGC CGACGACGTG CGGGTCCGGG TCGCGGAGCT GCGCGGGGCG
CGGGCCGAGC ACCGTCCCGA CCTGCTCGGC GGGGTGACCG TGCTCCAGCT GCCGGTCCAC
GCCGCGCTCG CGGCCGCCAC CGGCCCGCTG TACCGCCCCG CCGGGGACGA CCCCGCCCCC
GAGGCCGCCG AGGAGACCAC CGTCGTCCCC GCCGTCCCCT ACTACGCGTG GGCGAACCGG
GACCTGGGGG CCATGCGGAT CTGGCTCCCC CGGGCCTGA
|
|---|
| Protein sequence | MTSTTAGPDL TVATTANAPA APTAAAAVAL HPVPLGASRI RGGFWFERQE ANRRQAIRTG
YEKLETSGNL RNLRIAAGTE QGEAKGPIFM DSDVYKWLEA AGWEYGREAD EEVLGWIREV
TAVVAAAQAE DGYLDSVQQV RGKGERYVDL PWSHEHYCAG HLFQAAVAVH RSTGETGLLD
VAVKLADHLV ATFGPGKVEE VDGHPVVEMG LVELYRETGT QAYLDLARWF VDARGTGIIE
RLHGKEPTYF SDRVPVREQT SPEGHSVRAV YLTAGAADVA AETADGDLLA ALTRQWEGML
ASKTYVTGGI GARWDWEQFG DHYELGPERA YAETCAAIGS VQWTWRMLLA TGEARYADLV
ERTLYNAFLP GVSLAGTEYF YVNALQLRHG AFAEEERSVA HGRRPWFDCA CCPPNIMRTL
SSLDAYVATS SATDGVAGVQ VHQFTTGTIE AAGAALSVTT DYPWDGTVRV EVTATPGEFE
LALRVPAWAQ GATATVDGEA VAVTPGEYLR VRRDFAVGDV VELVLPMTVR VVEADPRVDA
VRGCVVVERG PLVYAVEQTD LPAGLPADDV RVRVAELRGA RAEHRPDLLG GVTVLQLPVH
AALAAATGPL YRPAGDDPAP EAAEETTVVP AVPYYAWANR DLGAMRIWLP RA
|
|---|
| |