Gene Krad_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3988 
Symbol 
ID5334054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp2899398 
End bp2900612 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content68% 
IMG OID 
Productisocitrate dehydrogenase 
Protein accessionYP_001363715 
Protein GI152967931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.324969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAGA TCAAGGTCCA GGGACCGGTC GTCGAGCTCG ACGGTGACGA GATGACCCGG 
ATCATCTGGC AGTTCATCAA GGACCGCCTG GTCCACCCGT ACCTCGACGT CGACCTGGAG
TACTACGACC TGGGCGTCGA GCACCGCGAC GCCACCGACG ACCAGGTGAC GATCGACGCG
GCCCACGCCA TCCAGCGGGC CGGGGTGGGC GTCAAGTGCG CGACGATCAC GCCCGACGAG
GCGCGCGTCG AGGAGTTCGG CCTCAAGAAG ATGTGGCGCT CGCCCAACGG GACGATCCGC
AACATCCTCG GCGGCGTGAT CTTCCGCGAG CCGATCATCA TCTCCAACAT CCCGCGCCTG
GTGCCGGGCT GGACCAAGCC GATCATCGTC GGCCGCCACG CCTACGGCGA CCAGTACCGC
GCGACCGACT TCAAGTTCCC CAGCGCGGGC ACCCTCACGG TGACCTTCAC CCCCGAGGAC
GGCTCCGAGC CCATCGAGCA CGAGGTCTTC CAGGCCCCCG GCGCCGGCGT CTCGCTGTCG
ATGTACAACC TCGACGCCTC GATCGTCGAC TTCGCGCGCT CCTCGCTCAA CTACGGCCTG
GCGCGCAACT ACCCGGTGTA CCTCTCCACG AAGAACACGA TCCTCAAGGC CTACGACGGC
CGGTTCAAGG ACATCTTCGA GGAGGTCTTC GAGAACGAGT TCAAGGACAG GTTCGCCGAG
GCCGGGATCA CCTACGAGCA CCGCCTCATC GACGACATGG TCGCCGCGTC CCTGAAGTGG
GAGGGCGGCT ACGTCTGGGC CTGCAAGAAC TACGACGGCG ACGTCCAGTC CGACACCGTC
GCGCAGGGCT TCGGCTCGCT GGGGCTGATG ACCTCGGTGC TGTCCACCCC GGACGGCTCC
GTGGTGGAGG CCGAGGCCGC CCACGGCACC GTGACCCGCC ACTACCGCCA GCACCAGCAG
GGCAAGCCGA CGTCGACGAA CCCGATCGCG TCGATCTACG CCTGGACCCG CGGGCTGGCC
CACCGCGGCA AGCTGGACTC CACCCCCGAG GTCACCGGCT TCGCCGAGAC CCTCGAGGAC
GTCGTCATCA AGACCGTCGA GAGCGGCAAG ATGACCAAGG ACCTCGCGCT GCTCGTCGGG
CCGGACCAGC CCTGGCAGAC CACCGAGGAG TTCCTCGGCA GCCTCGACGA CAACCTCGCC
GCGCGCCTGG CCTGA
 
Protein sequence
MAKIKVQGPV VELDGDEMTR IIWQFIKDRL VHPYLDVDLE YYDLGVEHRD ATDDQVTIDA 
AHAIQRAGVG VKCATITPDE ARVEEFGLKK MWRSPNGTIR NILGGVIFRE PIIISNIPRL
VPGWTKPIIV GRHAYGDQYR ATDFKFPSAG TLTVTFTPED GSEPIEHEVF QAPGAGVSLS
MYNLDASIVD FARSSLNYGL ARNYPVYLST KNTILKAYDG RFKDIFEEVF ENEFKDRFAE
AGITYEHRLI DDMVAASLKW EGGYVWACKN YDGDVQSDTV AQGFGSLGLM TSVLSTPDGS
VVEAEAAHGT VTRHYRQHQQ GKPTSTNPIA SIYAWTRGLA HRGKLDSTPE VTGFAETLED
VVIKTVESGK MTKDLALLVG PDQPWQTTEE FLGSLDDNLA ARLA