| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3982 |
|---|
| Symbol | |
|---|
| ID | 5333729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2904955 |
|---|
| End bp | 2906088 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | YP_001363709 |
|---|
| Protein GI | 152967925 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.571386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGAAC CCGAGGCGGC AGCGCTCGCG GTGCGGGCGG GTGCCACCGT CTTCTCCAAC
GAGAAGTCCA CGCTCGTGCA GACCGGCCCC CGGCCCCTGG TCCCCGGGGC CAGCGGGCTG
GAGCAGCTGC GGCGCACGAC GGCGGCCCTG GAGGGGGCGC CCGTCGGGCT GATCGCCGCC
GGCGCGGTCC CCTTCGACCT GCGCGGCCCC GGCGCCCTGC GGCTGGGGAC CTCGGCCTCC
ACCCCCGGCC CCCTGCACCT GCCCCCGGCC ACGCGCCGGC GCCAGGTCAC CGTCGCCCGC
AGCCGCCCCC GGCCCGCGCC CTCCGGCTAC GCCGACGCCG TGCGCACCGC CCTGGCCCGC
ATCGCCGACG GCGAGGTCGC CAAGGTCGTC CTGGCCCGCA CCCTGGAGCT GGAGGCGCTG
GACGACTGGT CGGTGCCCGA CCTCGTCGCC GAGCTCGTCA CCCGCAACCC CGGCGCGACG
GCGCTCGCCG TCCCCCTCGA CGACCCCGAC GACCCCCGGG CCCGCTGGCT GGTCGGCGCC
AGCCCCGAGC TGCTGCTGCG CCGCCGGGGG CCCAGCGTCC TGCTGCGCCC GCTGGCCGGT
TCCGCCCCCC GCTCCCCGGA GCCGGACGAG GACATCCGCC GCGCCGACGC GCTGCTGGCC
TCGGACAAGG ACCGCCGCGA GCACGCCTTC GTCGTCGACG CCATCGTCGA GGCCCTCCAG
CCCTTCTGCC GCACCATCAC CACCCCGGAG CCGGAGCTCG TCGCGACCCC GGCCGTGTGG
CACCTCGCGA CCCGGATCAC CGCCCTGCTC ACCGACACCG GCACCACCTC CGTCGACCTC
GTCGCCGCCC TGCACCCGAC CCCGGCGGTC GGCGGCTCGC CGCGGCCCGC GGCCATGCGG
GTGATCGACG AGGTGGAGGG CCTGGACCGC GGCTGCTACG CCGGGGCCGT GGGCTGGCAG
GACGTGCACG GGGACGGGGA GTGGGTCGTC GCCGTGCGCT GCGCGGAGGT CAGCGGCCGC
CGGCTGCGCG TCTTCGCCGG CGCGGGCATC GTCGCCGGGT CCGACCCCGA CGCCGAGGTG
GCCGAGACCG CGGCCAAGAT GCGCACCGTC CTGGACTCCG CGATCCCGCG CTGA
|
|---|
| Protein sequence | MSEPEAAALA VRAGATVFSN EKSTLVQTGP RPLVPGASGL EQLRRTTAAL EGAPVGLIAA
GAVPFDLRGP GALRLGTSAS TPGPLHLPPA TRRRQVTVAR SRPRPAPSGY ADAVRTALAR
IADGEVAKVV LARTLELEAL DDWSVPDLVA ELVTRNPGAT ALAVPLDDPD DPRARWLVGA
SPELLLRRRG PSVLLRPLAG SAPRSPEPDE DIRRADALLA SDKDRREHAF VVDAIVEALQ
PFCRTITTPE PELVATPAVW HLATRITALL TDTGTTSVDL VAALHPTPAV GGSPRPAAMR
VIDEVEGLDR GCYAGAVGWQ DVHGDGEWVV AVRCAEVSGR RLRVFAGAGI VAGSDPDAEV
AETAAKMRTV LDSAIPR
|
|---|
| |