| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3862 |
|---|
| Symbol | |
|---|
| ID | 5334814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3044039 |
|---|
| End bp | 3044980 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001363589 |
|---|
| Protein GI | 152967805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00112579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGGG TCGCCCTGCG GCGCACGCTG CAGGCGCTCG TCGTCCTGCT GGGGGTGTCC
GTCGCCACGT TCGCCCTGGT CCACCTGGTG CCCGGCGACC CGGTCCGGCT CGCGCTCGGC
ACCCGGTTCG ACCAGGCGAC CTACGACGCG CTGCGCGAGC GGGCCGGGCT GGACCAGCCG
CTGCTCGCGC AGTACCTCTC CTGGATCGGG CACGCCGTCA CCGGCGACCT CGGGGTGAGC
TTCCGCTCCG GGGACCCGGT GACCGCGCTC ATCCTGGAAC GGCTGCCCGC GACGCTGTCG
CTGGCGCTCG CCTCGATCCT GGTGGCGCTG CTCATCGCGA TCCCGCTGGG GACCGCCTCG
GCGCTGCGGC CGCGGTCGCT CGTCGACGGG TTCGGGACGG TGGTCAGCCA GATCGGCATC
TCGGTGCCGG AGTTCTGGAT GGGCATCATG CTCATCCTCG TCTTCGCGGG CACCCTGGGC
TGGTTCCCCG CCAGCGGGTA CGTCCCCCTC GGCGAGGACC CCGCCGGGTG GCTGCGGTCG
CTGGTGCTGC CGGCGGTGAC GACCGGGCTG GTGTCGGGCA GCGTCCTGAC CCGGTTCACC
CGCTCCAGCG TCCTGGAGGC GCTGGGCGCC GAGCACGTCC GCACCGCGCG CGCCAAGGGC
CTCGGCCCGC GGGCGGTGCT GAGGGGGCAC GTCCTGCGCA ACGCGATGCT GCCGCTGGTG
ACGGTGACGG GGGTGCAGCT GGCGTACCTG CTCTCGGGGG TCGTCGTGGT CGAGATCGTG
TTCGCCTGGC CGGGGCTGGG GCAGCTGGCG CTGCAGTCGG TCCAGGCGCG GGACTACCCG
GTGCTGCAGG GGGCGGTGCT GCTGTTCGCG TTCGTGTTCC TCCTGCTGAA CCTCGCGGTG
GACCTGCTGT ACTCCAAGCT CGACCCGAGG ATCGCCTCGT GA
|
|---|
| Protein sequence | MSGVALRRTL QALVVLLGVS VATFALVHLV PGDPVRLALG TRFDQATYDA LRERAGLDQP
LLAQYLSWIG HAVTGDLGVS FRSGDPVTAL ILERLPATLS LALASILVAL LIAIPLGTAS
ALRPRSLVDG FGTVVSQIGI SVPEFWMGIM LILVFAGTLG WFPASGYVPL GEDPAGWLRS
LVLPAVTTGL VSGSVLTRFT RSSVLEALGA EHVRTARAKG LGPRAVLRGH VLRNAMLPLV
TVTGVQLAYL LSGVVVVEIV FAWPGLGQLA LQSVQARDYP VLQGAVLLFA FVFLLLNLAV
DLLYSKLDPR IAS
|
|---|
| |