Gene Krad_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3823 
Symbol 
ID5333872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3082532 
End bp3084892 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content73% 
IMG OID 
ProductCellulose 1,4-beta-cellobiosidase 
Protein accessionYP_001363550 
Protein GI152967766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00048804 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCTTCGC ACCCCCGCAA GAGCCGTGCC CGCGCGCTGA CCGCGGTCAG CGCGCTGCTC 
GTCCCCGCCA GCCTCCTGCT GACCCCCTCC GCGGCCCAGG CCGCCGACCA GATCACCAAC
GGGTCCTTCG ACAACGGCAC CACCGGCTGG CAGGTCTACC CCACCGCCTC CGTCCAGGAC
GGCGCCGGCT GCACCACCGT GCCGGCCTCC ACCGGCGCCT ACGGCGCGGC CATCCAGCAG
GAGGTCCCGC TCACCGAGGG CGAGACCTAC AAGCTCTCGT TCCGGGCCCG CACCACCCCG
GCCACCACCG GGCCGGTGCG CGTGGTCGTC CAGGGCGGGG CGGACGTGAA CTACCAGCAG
TTCCTGCCCG CGGAGAAGCC CGCGTTCGAG AGCGCCTTCG GCACCTACGA GTACTACTTC
ACCGCCGACC GCGACTACCC CAACGCCCAG CTCGCGTTCC AGCAGGACGT CGTCAACCCC
GTCGCCTACA CCCTGTGCGT CGACGACGTG GTCCTGGAGG GCGGCGCCGA GCGCCCGCCG
TACGTGCCCG AGACCGGCCC CCGGGTCCGG GTCAACCAGG AGGCGTACCT GCCGCAGGGA
CCCAAGGGCG CCACCCTGGT CACCGACTCC ACCACCGCCC TGCCGTGGGA GCTGAAGAGC
GCCGGCGGCA CCGTCCTCGC CCGGGGCACC ACCACCCCCC GCGGCGTCGA CCCGAGCGCG
GGCCTGAACG TCCACGTGAT CGACTTCAGC GGCTACCAGC GGCGCAGCAC CGACCTCGTG
CTCACCGTCG ACGGGGAGAC CAGCCACCCC TTCGACATCG GCGAGGACGC CTACGAGCGC
CTGCGCGACG ACTCGATGAC GTTCTTCTAC ACCAACCGCA GCGGAACCCC GATCTCCGAC
GAACTGGCCC CCGGCTACGG CCGCGCCGCC GGTCACGTGG GCGTCGCCCC CAACCTCGGC
GACACCGCGG TGCCCTGCCA GAGCCTCGAG GACGACTCCC AGGAACTGCT GGTCAAGCAG
GGCGACCAGC CCTTCACCTG CGACTACACC ACCGACGTCA CCGGCGGCTG GTACGACGCG
GGCGACCACG GCAAGTACGT CGTCAACGGC GGCATCGCCG TGGGGCAGCT GCTGCAGCAG
TACGAGCGCA GCCTCACCGC CCCCACCGCG GACCGCGGCG CCCTCGCCGA CGGGACCCTG
AGCATCCCCG AGTCCGGGAA CCGCGTGCCC GACGTCCTGG ACGAGGCGCG CTGGGAACTG
GAGTGGTTCC TCAAGATGCA GGTCCAGCCG GGCCGCCCCT ACGCCGGGAT GGTCTTCCAC
AAGGTCGCCG ACGTCGACTG GACGGGCCTG CCGCAGGACC CGGCCACCGA CCCGCAGCCG
CGGGTCCTGT ACCGCCCCTC CACGGCGGCG ACCCTGAACG TGGCCGCCAC CGCCGCGCAG
GGCGCGCGCC TGTTCGCCCG CTACGACCGG GCGTTCTCCC AGCGCCTGCT CGCCACCGCG
CGCACGGCCT ACGCCGCCGC GCAGGCGAAC CCGGCCGTGT ACGCCCCGGC GCCGGACGCG
GCCCTCGACC CGAACCCGGG CAGCGGCCCC TACGACGACC GCGACGTGTC CGACGAGTTC
TACTGGGCCG CCGCCGAGCT GTACCTGACC ACCGGTGAGC CGCAGTTCCG CAAGGACGTC
CTGGGTTCCC CCGTCCACAC CGCCGACGTG TTCCCCGCCG GTGGTTTCGA CTGGGGCCAC
GTCGGGGCGC TGGCCCGCCT CGACCTGGCC ACCGTGCCCA GCGAGCTGAA CCAGCGCGAG
CGGCGCGCCG TGCGGCGCTC GGTGACCGAG GCCGCCGACC GCCTGCTCAT CGACCAGGCC
GGCCAGCCGT TCGGGCAGCC CTACGCCCCC GAGGGCGGGC AGTACGCGTG GGGTTCGAAC
TCGGGGATCC TCGCCAACCT GCAGGTCCTG GGCACCGCCT TCGACCTCAC CGGTGACGAC
GCCTACCGCG ACGGGGTGGT CCGCGGCATG GACTACCTGC TCGGGCGGAA CGCGCTGAAC
AACTCCTACA TCACCGGCTA CGGCGACGTG TTCTCGAAGA ACCAGCACTC GCGGATGTAC
GCCAACCAGC TCGACCCCTC CCTGCCCAAC CCCCCGGCGG GCACGGTGGC CGGCGGCCCG
TACTCCCCCA CCGCCACCAG CGGTGACCCG ATCACGGCCC CGCTGTTCCC CGAGGGCTGC
GCGGCGCAGT TCTGCTACGT GGACGACATC GGGTCGTGGT CGACCAACGA GATCACGGTC
AACTGGAACG CCCCGCTGGC CTGGGTGGCG TCCTTCGTCG CCGACCAGGA CGGCGGTCGC
GACGAGCGTC AGCGACGCTG A
 
Protein sequence
MPSHPRKSRA RALTAVSALL VPASLLLTPS AAQAADQITN GSFDNGTTGW QVYPTASVQD 
GAGCTTVPAS TGAYGAAIQQ EVPLTEGETY KLSFRARTTP ATTGPVRVVV QGGADVNYQQ
FLPAEKPAFE SAFGTYEYYF TADRDYPNAQ LAFQQDVVNP VAYTLCVDDV VLEGGAERPP
YVPETGPRVR VNQEAYLPQG PKGATLVTDS TTALPWELKS AGGTVLARGT TTPRGVDPSA
GLNVHVIDFS GYQRRSTDLV LTVDGETSHP FDIGEDAYER LRDDSMTFFY TNRSGTPISD
ELAPGYGRAA GHVGVAPNLG DTAVPCQSLE DDSQELLVKQ GDQPFTCDYT TDVTGGWYDA
GDHGKYVVNG GIAVGQLLQQ YERSLTAPTA DRGALADGTL SIPESGNRVP DVLDEARWEL
EWFLKMQVQP GRPYAGMVFH KVADVDWTGL PQDPATDPQP RVLYRPSTAA TLNVAATAAQ
GARLFARYDR AFSQRLLATA RTAYAAAQAN PAVYAPAPDA ALDPNPGSGP YDDRDVSDEF
YWAAAELYLT TGEPQFRKDV LGSPVHTADV FPAGGFDWGH VGALARLDLA TVPSELNQRE
RRAVRRSVTE AADRLLIDQA GQPFGQPYAP EGGQYAWGSN SGILANLQVL GTAFDLTGDD
AYRDGVVRGM DYLLGRNALN NSYITGYGDV FSKNQHSRMY ANQLDPSLPN PPAGTVAGGP
YSPTATSGDP ITAPLFPEGC AAQFCYVDDI GSWSTNEITV NWNAPLAWVA SFVADQDGGR
DERQRR