| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3733 |
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| Symbol | |
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| ID | 5335711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | - |
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| Start bp | 3184997 |
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| End bp | 3186784 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | glycoside hydrolase family 20 |
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| Protein accession | YP_001363460 |
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| Protein GI | 152967676 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0925128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00246755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCTGTCA CCCCCTTCCC CCGTCCGAAG TCGATGTCGA CGACGACCGG CAGCGGTCCC
GCCCCCGGCG CCACCGTGCG CGTGGTCCTC GACCCCGCCG TCCCGGCCCA GGGCTTCCGG
GTCCAGACCT CCGCCGAAGG CATCACCGTC ACCCACGCCG ACGCCGCCGG CCTGCGCTAC
GGGCTCGCGA CGCTGGACCA GCTGCGCGCC GGCGTCGACT TCGCGACGAC GAGCTACGAC
ATCAGCGACC ACCCGGACTT CCCCGTCCGC GGCTTCATGC TCGACGTCAG CCGGGACCGG
GTGCCGACCC GGCGCACCCT GGCCCGCTGG GTCGAGGTCA TGGAACTCAG CCGCATCAAC
GCCTTCGAGC TCTACACCGA GCACACCTAC GCGTTCCGCG GGGAGCAGGC GGTGTGGCAG
GACGCCTCCC CGCTGACGGC CGCGGACCTG CAGTGGCTGG ACGCCCTGTG CGCGTCGAAG
GGCATCGAGC TGGTCTGCAA CCAGAACACC CTCGGGCACA TGGAGCGCTT CCTCAAGCAC
CCCCAGCACG CCAAGCGCGC CGAGAACGAG GACGGGTTCA CGATGCGCGG GCTGCACCGC
CCGCCCAGCA CCGTGGAACC GACCCCGGAG AACGCGGAGT TCGTGCAGGG TCTGCTGGAG
GACGTCGTCC CCAACTTCCG GACCCGCCGC ATCAACATCG GCGCCGACGA GCCGTGGGAG
CTGGGCACCG GCAAGAGCGC CCAGCGGGCC GAGGAGGTGG GCCTGGGCAC CGTCTACTTC
GAGTACGTCA CCTCCGTCAT GCAGCCGTGG CTGGACCGCG GCTACGCGGT GGAGTTCTGG
GCCGACGTCT TCGGCGACCA CCCCGAGCTC ATGGACAAGG TCCCCGCCGG GGCGATCCCC
GTCGTGTGGC AGTACGACTC CCCGCAGCTG CTGGCCGAGG TGCTGGACGC CGACGGCGGG
CAGGTGCAGG AGTGGCGCGC CCAGGGCCTC GACGTCACCG CCCTGCGCGA CGGGTTCCGC
GACCGGGCCA AGCTCCTCCT CGAGGCCGGG ATCCCGTTCT GGGTGGCCCC GGGCACCAGC
AGCTGGAACT CGCTGCTGGG CCGCTGGGAG AACGCCGTCG GCAACATGGT CGACGCCGCC
GAGGTCGGGC TGGAGAACTC CGCGCAGGGC TTCCTCAACA CCGCCTGGGG CGACCACGGC
CACTGGGACC CGCCGTCGGT CGCCTTCGGC CCGGCCCTCT TCGGCGGGGC GGTGTCCTGG
TCGCTGGAGG ACAACCGCGA CGTCGACGTC GCCGCCGTCC TCTCCGACGC GCTGCTGATG
GACCCCACCG GGATCACCGG CGACGTCCTC GTCCGCTCCG GGCGGGTGAC CGCGCAGCTG
GGGGCGCCGC TGCTCAACGC CTCCCCGCTG GTCCTGGTGC TGCGCGAACC GGACCAGCTC
AAGCCGTGGG CCGTGCCCAC CCCCGAGGCC CTGGCCGCGG CGCACGCCAC GCTCACCTCC
TGCCTGGACG ACCTGCGCGC GGCGGAACCG GCCTGCGCCG ACGGCGACGT CGTGCTGCGG
GAACTGGCCC AGGCGCTGCG GCTGTCCGAC CTCGCGGTGC GGGCCCTGCA GGTGCGCGCC
GACGACGGGT CCTTCGAACC GGTCGCGGCG GGCCGGCTGC TCGTCGAGCT CGAGGCGCTG
CTGGAGGAGC AGCGGACCTG CTGGCTGCTG CGGTCGCGAC CCGGGGGGCT CTCGGACAGC
CTCGCGGAGT TCGGCCTGCG GCACGCGCTG CTGCGCTCGG GGAGCTGA
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| Protein sequence | MPVTPFPRPK SMSTTTGSGP APGATVRVVL DPAVPAQGFR VQTSAEGITV THADAAGLRY
GLATLDQLRA GVDFATTSYD ISDHPDFPVR GFMLDVSRDR VPTRRTLARW VEVMELSRIN
AFELYTEHTY AFRGEQAVWQ DASPLTAADL QWLDALCASK GIELVCNQNT LGHMERFLKH
PQHAKRAENE DGFTMRGLHR PPSTVEPTPE NAEFVQGLLE DVVPNFRTRR INIGADEPWE
LGTGKSAQRA EEVGLGTVYF EYVTSVMQPW LDRGYAVEFW ADVFGDHPEL MDKVPAGAIP
VVWQYDSPQL LAEVLDADGG QVQEWRAQGL DVTALRDGFR DRAKLLLEAG IPFWVAPGTS
SWNSLLGRWE NAVGNMVDAA EVGLENSAQG FLNTAWGDHG HWDPPSVAFG PALFGGAVSW
SLEDNRDVDV AAVLSDALLM DPTGITGDVL VRSGRVTAQL GAPLLNASPL VLVLREPDQL
KPWAVPTPEA LAAAHATLTS CLDDLRAAEP ACADGDVVLR ELAQALRLSD LAVRALQVRA
DDGSFEPVAA GRLLVELEAL LEEQRTCWLL RSRPGGLSDS LAEFGLRHAL LRSGS
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