| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3726 |
|---|
| Symbol | |
|---|
| ID | 5335068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 3193688 |
|---|
| End bp | 3195256 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001363453 |
|---|
| Protein GI | 152967669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.136325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00703863 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACG ACGACCGCGT CGACGGCGAC GCACCGGGGC GGCCCGTCCC CGCCGGCCCC
GCGACGGTGG AACCCCTGCT GGTCGCGCGG GGCATCGTCA AGGAGTTCTC CGGGGTGCGC
GCCCTGGACG GGGTGGACCT CGAGGTGCGG CCCGGGGAGG TGCACTGCCT GCTCGGGCAG
AACGGCGCGG GCAAGTCCAC CCTCATCAAG GTCCTGGCCG GGGCGCACCA GCCCACCGCC
GGGGCCGTCC GGTGGCTGGG CGAGGAGGTC GTCCTGCCGA CCCCGGTCGC GGCGCTGCGC
ACCGGCATCG CCACGATGCA CCAGGAGCTC GACGTCGTCG ACGGCCTCAC GGTGGCCGAG
AACGTCCACC TCGGGCACGA GACCTCCCGG GCGGGGCTGA CCCGGCGCCG CGAGGCGCAC
GCCCGCACCC GGGACCTGCT CCGGCGGCTC GGCCACGGCG AGATCTCCCC CACCCGGGAG
GTCGGTTCCC TCTCCGCGGC GGGCAAGCAG GTGGTGAGCA TGGCGCGCGC CCTGTCGCAC
GAGGCCCGGC TCATCGTCAT GGACGAACCC TCCGCGGTCC TCGACTCCGA GGAGGTCGCG
AACCTGTTCC GGGTGGTGCG GCAGCTCACC GCCGCCGGGG TCGCCGTGCT CTACATCTCC
CACCGCCTGG AGGAGATCCG CCGGGTCGGG GACCGGATCA CCGTCCTCAA GGACGGCCGC
ACGGTCGCCG CGGGCCTGCC CGTCGCCGGG ACCCCCACCG CGGAGCTGAT CCGGCTGATG
ACCGGCCGCG CGGTGGACCA GGTCTTCCCC GCCCGCACCC CCGTGCCCGC GGACCGCGAG
ACGCTGCTGG AGGTGCGCGA CCTGGGGTTG CGGGGTTCCT TCTCCGACGT CTCCTTCAGC
GTGCGCGCCG GCGAGGTCGT GGGCCTGGCC GGACTGGTCG GTTCGGGGCG CTCGGAGATC
CTGGAGACCG TCTTCGGCGC CCGCCGGGCG ACGGCGGGGC AGGTCCTGGT CGGCGGCCGG
CCGCTGCGAC CGGGATCGGT CGCCGCGGCC GTGCGCGCCG GGATCGGGCT GGCCCCGGAG
GAGCGCAAGA GCCAGGGCCT GCTGCTCGAC GAGCCGGTGT ACCGGAACAT CACCCTCTCG
ACGTTCGGGC GCTTCGCGCG CGGGCCCGTC CTCGACGAGC GCGCGGAACG GGCCAGCGCG
CGGGAGCAGA TCGCCGCCCT CGACCTGCGC CCGGCCGACC CCGACCGCCC GGTGCGGACC
CTCTCCGGGG GCAACCAGCA GAAGGCCGTG CTCGCCCGGT GGCTGGTGCA CGGCTGCCGG
GTCCTGCTGC TCGACGAACC CACCCGGGGC GTGGACGTGG GCGCGCGCGC CGAGGTGTAC
GCCCTGGTGC GGTCGCTGAC CGCGGCCGGC AACGCCGTCG TCGTGGTGTC CAGCGAGATC
GAGGAGGTGC TCGGCCTCTC CCACCGCGTC CTCGTCGTCG CCGAGGGCCG GGTCCTGCAC
AGCGGCCCCG CGGACCGGAT CGACGAGCAC CGGGTGCTCG ACCTCGTCAT GGAAGGACGT
GCCGCGTGA
|
|---|
| Protein sequence | MVNDDRVDGD APGRPVPAGP ATVEPLLVAR GIVKEFSGVR ALDGVDLEVR PGEVHCLLGQ
NGAGKSTLIK VLAGAHQPTA GAVRWLGEEV VLPTPVAALR TGIATMHQEL DVVDGLTVAE
NVHLGHETSR AGLTRRREAH ARTRDLLRRL GHGEISPTRE VGSLSAAGKQ VVSMARALSH
EARLIVMDEP SAVLDSEEVA NLFRVVRQLT AAGVAVLYIS HRLEEIRRVG DRITVLKDGR
TVAAGLPVAG TPTAELIRLM TGRAVDQVFP ARTPVPADRE TLLEVRDLGL RGSFSDVSFS
VRAGEVVGLA GLVGSGRSEI LETVFGARRA TAGQVLVGGR PLRPGSVAAA VRAGIGLAPE
ERKSQGLLLD EPVYRNITLS TFGRFARGPV LDERAERASA REQIAALDLR PADPDRPVRT
LSGGNQQKAV LARWLVHGCR VLLLDEPTRG VDVGARAEVY ALVRSLTAAG NAVVVVSSEI
EEVLGLSHRV LVVAEGRVLH SGPADRIDEH RVLDLVMEGR AA
|
|---|
| |