Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3617 |
Symbol | |
ID | 5334164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 3310976 |
End bp | 3312985 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | protein of unknown function DUF839 |
Protein accession | YP_001363344 |
Protein GI | 152967560 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.268423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0412956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGCCA CCGACGACCG CCGCCCGCTG CTGGACCTGC TGCCGTACTC CCCCGCCGGC CGCCGCAGCC CCATGACGTG CCACTACCGC TGCGCCACCT CGTGCGCGGT CCCCGCCCCC AACCACTCCG GCAACGCCTA CTTCGGCGAC GTCGTGCGCG CCGCGGTGTC GCGGCGCGGC GTGCTGGCCG GCCTCGTCGG GCTGGGGGTC GCCGGGGCCG CCGTGGCGCA GGCCCAGCCC GCCAGCGCCT TCGGCGGCGG GGACGACGTG AACCTGCTCG CCGACCCGTT CGACCCCGGT CACGTCGTGG ACTTCGACGT CATCGCCCCG GTGTCCGCGG AGGTCGACTC CTTCGACGTC CCCGCGGGCT GGACCTGGGC GCCGCTGATC TCCTGGGGCG ACCCGATCCT GCCCGGCGCC CCGGACTTCG ACTTCGAGAA CCAGACCGCC GAGGCCCAGC TGGGGCAGTT CGGCTACAAC AACGACTACA CCACCATCGT CCCCCTGCAG GACCCGAACC GGGCCCTGCT GGTGTGCAAC AACGAGTACA CCAACGAGGA ACTCATGTTC CGCGACTGGG TCGACGCGCA GAGCGCCACC GACGAGCAGC TGCGCATCTC GCTGGCCGCC CACGGCATGT CCGTCGTCGA ACTGCGCCGG GCGGACGCGG ACTCCCCGTG GGGCTACGTG CGCGGCTCGG ACTTCAACCG CCGCATCACG CCCATGACCC CGATGCGGTT CACCGGCCCC GCCGCCGGCG CGAAGGCGCT GCGCACCGAG GCCGACCCGC AGGGGCGCAC GCCGGTCGGG ACCTTCGGCA ACTGCGCCGG CGGCACGACG CCGTGGGGCA CGGTGCTGTC GGGCGAGGAG AACTTCAACG GCTACTTCTC CTCCCCCGAG GTCGAGGGCG GCCAGAGCGA CCGCTACAGC GTCTACGGCA GCGGCGGGCG CGCCTGGGAG CGCGTCGAAC CGCGCTTCAG CGCCGAGAAC GAGCCCAACG AGGCCAACCG CTTCGGCTGG ATCGTCGAGG TCGACCCCTC CGACCCGACC TCCACGCCGC GCAAGCACAC CGCCATGGGG CGCATGAAGC ACGAGGGCGC CACCGTCTCC CTCGCCGCCG ACGGCCGCGT GGTGTCGTAC ATGGGCGACG ACGAGCGCTT CGAGTACCTC TACAAGTTCG TCTCCAAGCG CACGTACCGC GAGGGCGACC GGAAGCACAA CATGCGCCTG CTGGAGGACG GCGACCTCTA CGTCGCGGTC TTCGAGGGCG ACGGCATCGA GGACGAGCGC TACGACGGCC GCGGCCGCTG GGTGCAGCTG ACCCGCGGCG GCCGCTCGGT GGTGCCGGGC ATGTCGATCG ACCAGGTGCT GGTGAACACC CGCGCCGCCG CCGACGTCGT GGGCGCCACC AAGATGGACC GCCCCGAGGA CGTCGAGCGC AACCCCGTCA ACGGCCGCGT GTACGTCGCC TGCACCAACA ACACCCGCCG CGGCACCCTG GGCCAGCCCG GGGTCGACGA GGCGAACCCG CGCCCGCTCA ACAAGGACGG GCACGTCGTG GAGATCGTCG AGGCGCGCGA CGACGCCGCG GCGACCACGT TCTCGTGGAA CCTCGTCCTC GTCTGCGGCG ACCCGGAGGA CCAGAGCACC TACTTCGGCG GTTTCGACCC CGCGCAGGTC TCGCCGATCT CCTGCCCGGA CAACGTGGCC TTCGACACCA CGGGCAACCT GTGGATCTCC ACCGACGGCA ACACGCTGGG CTCCAACGAC GGCCTGTACG AGGTCGTCGT CGACGGCCCG AACCGCGGCC AGGTCCGGCA GTTCCTCTCG GTGCCGACGG GCGCGGAGAC CTGCGGGCCG GTCATCGCCG ACGACGGGCG CACGGTGTTC GTCGCCGTGC AGCACCCCGG TGAGGTCGAC GGGGCGACCA TCGACGACCC GGCCTCGACC TTCCCCTACG ACGGCACGGG CCAGCCGCGC CCGTCGGTCG TGCAGGTCCG CCGGGCCTGA
|
Protein sequence | MTATDDRRPL LDLLPYSPAG RRSPMTCHYR CATSCAVPAP NHSGNAYFGD VVRAAVSRRG VLAGLVGLGV AGAAVAQAQP ASAFGGGDDV NLLADPFDPG HVVDFDVIAP VSAEVDSFDV PAGWTWAPLI SWGDPILPGA PDFDFENQTA EAQLGQFGYN NDYTTIVPLQ DPNRALLVCN NEYTNEELMF RDWVDAQSAT DEQLRISLAA HGMSVVELRR ADADSPWGYV RGSDFNRRIT PMTPMRFTGP AAGAKALRTE ADPQGRTPVG TFGNCAGGTT PWGTVLSGEE NFNGYFSSPE VEGGQSDRYS VYGSGGRAWE RVEPRFSAEN EPNEANRFGW IVEVDPSDPT STPRKHTAMG RMKHEGATVS LAADGRVVSY MGDDERFEYL YKFVSKRTYR EGDRKHNMRL LEDGDLYVAV FEGDGIEDER YDGRGRWVQL TRGGRSVVPG MSIDQVLVNT RAAADVVGAT KMDRPEDVER NPVNGRVYVA CTNNTRRGTL GQPGVDEANP RPLNKDGHVV EIVEARDDAA ATTFSWNLVL VCGDPEDQST YFGGFDPAQV SPISCPDNVA FDTTGNLWIS TDGNTLGSND GLYEVVVDGP NRGQVRQFLS VPTGAETCGP VIADDGRTVF VAVQHPGEVD GATIDDPAST FPYDGTGQPR PSVVQVRRA
|
| |