| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3566 |
|---|
| Symbol | |
|---|
| ID | 5334008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3372571 |
|---|
| End bp | 3373875 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_001363293 |
|---|
| Protein GI | 152967509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0143758 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACGC CGTCCCGCAA GTCGCTGTCG CTGTCCATGT CCCGTCGCCG CGCCCTCGCC
CTCGGCGGCC TCGCCGGCGG TCTCACCCTC ACCGCCTCGG CCTGCTCGTC CGGCTCGGGC
GGCTCCAGCG ACCCCAACAC CTTCGAGTTC TGGTCCTTCA CCGGCATCAA CCAGAAGGAC
TCCGTCGAGG AGTACAAGGC GCTCGCGCCC GACGTCACGG TCAAGCTCAC CGAGGTCGGC
AACGCCCAGG AGACCGCGCA GGGCCTGACC ACCGCGCTGG CCGGCGGCAA GGTCCCCGAC
CTGGTGCTCA TCCAGGCCGG CGACCTGCCC AAGTTCATGA AGAACCCCGG CAACTTCATC
GACCTCACCA CCCTCGGCGC CGACGAGATC CAGGACGACT ACGTGGACTG GGTGATGGCG
CAGGCCACCG CCGAGTCCGG CGAGGTCATC GGCATCCCCA CCGACGTCGG CGGCATGGGC
GTCGCCTACC GCACCGACCT CATGGCCGCG GCCGGGCTGC CCACCAACCG CGACGAGGTC
AGCGCGCTGT GGCCGACGTG GGAGGACTTC ATCGCCACCG GCCAGCGCTA CACCCAGGCG
ACCGGCAACG CGTTCATCGA CAACGCGGCC ACCACCGTCT TCCTGCAGGC CGTCTCGCAG
GGGGAGGAGC AGTACTACTC CGCCGACGGC GAAGTGGTCT ACGACACCAA CCCCATCGTC
CGGGAGTCCT TCGACCTCGG GCTCAAGGCC ATCGCCGCCG GGATCACCGC GAAGCTGGAG
AGCTTCACCG ACGGCTGGAA CGCCGGCATG GCCAAGGGGG CCTTCGCCGC CGTCGCCGCA
CCGTCCTGGA TGCTCGGCTC CATCCGCTCC GCGGCCCCCG ACACCGAGGG CAAGTGGGAC
ATCGCCACCA TCCCCGGCGG CAGCGGCAAC TGGGGCGGCA GCTACCTCGC CATCCCGGCC
CGCGCGGCCA ACCCGCAGGC GGCGTGGAAG TACGCGTCGA CGATGCAGTC CCCCGAGCAG
CAGCTCAAGC ACTTCGTGGA CTCCGGTTCC CTGCCCACCA CCCCGGTGAA CTACGACAAG
CCGGAGCTGG TGAACCACAC CGACCCCTTC TTCAGCGGCG CCCCCACCGG CAAGATCTTC
ACCCAGGCCG TGCTGGGCCT GAAGCCCTTC GTCAACGGCG AGTACAACAC CGAGATCAGC
ACCGAGCTGC TCAACGGCCT CAACGGCGTC GAGGGCGACG GCGCCCCCGC CGACGCGGCG
TGGGACACCG CGGTCAAGAA CATCAAGACG GCGATCGGCG CCTGA
|
|---|
| Protein sequence | MNTPSRKSLS LSMSRRRALA LGGLAGGLTL TASACSSGSG GSSDPNTFEF WSFTGINQKD
SVEEYKALAP DVTVKLTEVG NAQETAQGLT TALAGGKVPD LVLIQAGDLP KFMKNPGNFI
DLTTLGADEI QDDYVDWVMA QATAESGEVI GIPTDVGGMG VAYRTDLMAA AGLPTNRDEV
SALWPTWEDF IATGQRYTQA TGNAFIDNAA TTVFLQAVSQ GEEQYYSADG EVVYDTNPIV
RESFDLGLKA IAAGITAKLE SFTDGWNAGM AKGAFAAVAA PSWMLGSIRS AAPDTEGKWD
IATIPGGSGN WGGSYLAIPA RAANPQAAWK YASTMQSPEQ QLKHFVDSGS LPTTPVNYDK
PELVNHTDPF FSGAPTGKIF TQAVLGLKPF VNGEYNTEIS TELLNGLNGV EGDGAPADAA
WDTAVKNIKT AIGA
|
|---|
| |