Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3551 |
Symbol | |
ID | 5333772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3389862 |
End bp | 3390362 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | HNH endonuclease |
Protein accession | YP_001363278 |
Protein GI | 152967494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00264695 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGTGC GCACTCTCGT GCTGAACGCC GGCTTCGAGC CGCTCGCGGT GGTCTCCTTC CGCAGGGCCC TCGTCCTCGT CCTCGCCGGG AAGGCGTCGG TGGTCCTCGC CGACCCCGAC CCCGTCGTCG GCGCGACGAT GAGCCTGGAA CGGCCGTCGG TCATCCTGCT GACCCGCTAC GTCCGCGTCC CCCGCGGGCA GGTGGTCCCG GTCAGCCGGC GCGGCGTCCT GCGCCGCGAC CACCAGCGCT GCGCCTACTG CCGCGGGCAC GCCACGACCA TCGACCACGT CCTGCCGCGC AGCCGCCGGG GGCCGGACAC CTGGGAGAAC CTCGTGGCCT GCTGCGTGCG GTGCAACAAC GCCAAGGGCG ACCGCACCCC CGAGGAGATG GGCTGGAGCA TGCCCTTCCG GCCCACCGCG CCCCGCGGGG CGTCCTGGGC GGTGCGGGGC GCCGAGCAGC CCGACCCGCG CTGGGACGAG TTCCTGGCCG CGGCCGCCTG A
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Protein sequence | MDVRTLVLNA GFEPLAVVSF RRALVLVLAG KASVVLADPD PVVGATMSLE RPSVILLTRY VRVPRGQVVP VSRRGVLRRD HQRCAYCRGH ATTIDHVLPR SRRGPDTWEN LVACCVRCNN AKGDRTPEEM GWSMPFRPTA PRGASWAVRG AEQPDPRWDE FLAAAA
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