| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3365 |
|---|
| Symbol | |
|---|
| ID | 5335479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3615801 |
|---|
| End bp | 3616967 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | putative TIM-barrel protein, nifR3 family |
|---|
| Protein accession | YP_001363093 |
|---|
| Protein GI | 152967309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.815066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00739513 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAC CCACCCTGAC GGCCGTCCAG CCGCTGCGGA TCGGACCGCA CGTCTCCCCG
ACGCCGGTCG TCCTGGCCCC CATGGCCGGC ATCACCAACA CCGCCTACCG GCAGCTGTGC
CGCGAGCACG GCGAGGGCTT CTACGTCAGC GAGATGGTCA CCTCCCGCGC CCTCGTCGAG
CGCCACGCCG AGACGATGCG GCTGGTGACG TTCACCGCCT CCGAGCGCCC CCGCAGCCTG
CAGCTCTACG GCGTGGACCC CACGACCGTG GCCGCGGCGG TGCGGATGGT CGTCGAGGAC
GACCTCGCCG ACCACGTCGA CCTCAACTTC GGCTGCCCCG TGCCCAAGGT CACCCGCAAG
GGCGGCGGGT CCGCGCTGCC CTGGAAGGCG GAGCTGTTCC GCTCCATCGT CCGCGGCGCG
GTCGCCGAGG CGTCGCGCGG CGGGATCCCG CTGACGGTGA AGATGCGCAA GGGCATCGAC
GACGACCACC TCACCTACCT GCAGGCCGGC AAGGCCGCCG AGCAGGAGGG GGCCGCCGCC
GTCGCCCTGC ACGGGCGCAC CGCGTCCCAG CACTACTCCG GGCAGGCCGA CTGGGAGGCG
ATCGCCCGGC TGAAGGAGAC CGTCACCACG ATCCCCGTCC TCGGCAACGG CGACGTCTGG
AGCGCCGAGG ACGCGCTGGA GATGGTGCGC CGCACCGGGT GCGACGGCGT CGTCGTCGGC
CGCGGCTGCC TCGGCCGGCC CTGGCTGTTC GCCGACCTCG AGGCCGGTTT CGCCGGGCGC
GAGGACCGGG TCAAGCCGGG GCTGCGGCAG GTCGCGCAGG TCCTGCGCCG CCACGCCGAA
CTGCTGGTCG AGTTCTACGG CGACGAGCTG CGCGGCTGCC GCGACATCCG CAAGCACGTC
TCCTGGTACC TCAAGGGCTA CCCCGTGGGC GGGGACGTGC GCGCCCGCCT CGGCCTCGTC
GACACCCTCG AGGCCCTCGA CGAGCTGCTG GACTCCCTCG ACCTCGACCT GCCCTACCCG
GGGGCGGCCG CCGAGGGCTC GCGCGGCCGG GCGGGTTCCC CCCAGGCCCG CGTCGCCCTG
CCCGAGGGGT GGCTGGACGA CCAGGAGCTC ACCGGTCCCG CGGCCGAGAT GATCCGCCAG
GCCGAGCTGT CGGTGTCGGG CGGATGA
|
|---|
| Protein sequence | MSAPTLTAVQ PLRIGPHVSP TPVVLAPMAG ITNTAYRQLC REHGEGFYVS EMVTSRALVE
RHAETMRLVT FTASERPRSL QLYGVDPTTV AAAVRMVVED DLADHVDLNF GCPVPKVTRK
GGGSALPWKA ELFRSIVRGA VAEASRGGIP LTVKMRKGID DDHLTYLQAG KAAEQEGAAA
VALHGRTASQ HYSGQADWEA IARLKETVTT IPVLGNGDVW SAEDALEMVR RTGCDGVVVG
RGCLGRPWLF ADLEAGFAGR EDRVKPGLRQ VAQVLRRHAE LLVEFYGDEL RGCRDIRKHV
SWYLKGYPVG GDVRARLGLV DTLEALDELL DSLDLDLPYP GAAAEGSRGR AGSPQARVAL
PEGWLDDQEL TGPAAEMIRQ AELSVSGG
|
|---|
| |