| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3353 |
|---|
| Symbol | |
|---|
| ID | 5337658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 3626420 |
|---|
| End bp | 3627715 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_001363081 |
|---|
| Protein GI | 152967297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0223363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0333658 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCG ATGCCGTGCC CGCTCCCGCC CCGCCCGACG CACCGCCCCG GGCGGCGGAC
GTCGAAGCGG CGGCCGAGCG GCTGTCCCGG GTCGTGACCC GCACCCCCCT CGCCACCAGC
GCCCGCTGGT CGGCCGCCCT GGGGGCGCAC GTGCGCGTCA AGCGGGAGGA CCTCCAGGTC
GTGCGCTCCT ACAAGCTGCG CGGGGCCTAC AACCTGGTCT CCCAGCTCAC CGACGAGCAG
CGCGGGCGCG GGGTGGTCAC CGCGAGCGCC GGCAACCACG CCCAGGGCCT GGCCTACGCC
TGCGCGGCCC TGCGGGTGCG CGGACGCATC TACGTGCCGC GCACGACCCC GCGCCAGAAG
CGGGACCGCA TCGCCGCCCT GGGCCAGGAG TTCGTGGAGA CCATCGTCCT GGGCGACACC
TACGACGACT CCGCCGCCGC GGCGCTCGAG GACGCCGAGC GCACCGGCGC GACGATGGTG
CCCGCCTTCG ACGACGCCCG GACGGTCGCG GGGCAGGGCA CGGTCGCGGT CGAGGTCTTC
GAGCAGCTCG AGCAGCTCGG CGAGGGCCCG CCGGACGTGG TCGTCGTCCC CGTCGGCGGG
GGCGGGCTGC TGGCCGGGGT GCTGGCCTGG GTCCGCGAGC GGCACCCGCA GGTGCGGGTC
GTGGGGGTGG AGCCCGCGGG GGCGCCCTCG ATGGCGGCGG CGCTGGCCGC CGGTCGTCCG
GTGCGGCTGG AGCACCTGGA CACCTTCGTC GACGGCGCCT CGGTCCGCCG CGTCGGCGAC
GTCCCGCACG CCGTGGTGGC CGGTCACGAG GTGGAGCTCG TCGCGGTGCC CGAGGGGGCG
ATCTGCGTGG AGATGCTGGC GATGTACCAG ACCGACGGGA TCATCGCCGA GCCCGCGGGG
GCGCTGGCCA CGGCGGCGCT GGCGGAGGCG GTCCGCGTCG AACCGGGCCA GAGCGTGGTC
TGCGTGGTCT CCGGCGGCAA CAACGACATC AGCCGCTACG CGGAGATCAT CGAGCGGGCC
CTCGTCCACG AGGGCCGCAA GCACTACTTC CTCGTGGAGT TCCCGCAGGA GCCCGGTGCG
CTGCGCCGCT TCCTCGACGA GGTGCTCGGC CCGGACGACG ACGTCACGCT CTTCGAGTAC
GTCAAGCGGA ACAACCGCGA GTTCGGGCCG GCCCTGGTGG GCATCGAGAT CCCCGGCAAG
GACGACCTGC CGGGGCTGCT GGCCCGGATG GAGGCCGCTC CCCCGTCGTT CGAGCGGATC
TCGGCGACGG ACCCGCTGTA CCGCTACCTG TTGTAG
|
|---|
| Protein sequence | MSLDAVPAPA PPDAPPRAAD VEAAAERLSR VVTRTPLATS ARWSAALGAH VRVKREDLQV
VRSYKLRGAY NLVSQLTDEQ RGRGVVTASA GNHAQGLAYA CAALRVRGRI YVPRTTPRQK
RDRIAALGQE FVETIVLGDT YDDSAAAALE DAERTGATMV PAFDDARTVA GQGTVAVEVF
EQLEQLGEGP PDVVVVPVGG GGLLAGVLAW VRERHPQVRV VGVEPAGAPS MAAALAAGRP
VRLEHLDTFV DGASVRRVGD VPHAVVAGHE VELVAVPEGA ICVEMLAMYQ TDGIIAEPAG
ALATAALAEA VRVEPGQSVV CVVSGGNNDI SRYAEIIERA LVHEGRKHYF LVEFPQEPGA
LRRFLDEVLG PDDDVTLFEY VKRNNREFGP ALVGIEIPGK DDLPGLLARM EAAPPSFERI
SATDPLYRYL L
|
|---|
| |