Gene Krad_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3300 
Symbol 
ID5333617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3677571 
End bp3679253 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content76% 
IMG OID 
Productalpha amylase catalytic region 
Protein accessionYP_001363028 
Protein GI152967244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.522775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.208807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACC TCCTCGACCA CGCCACCACC CCCTCCTCGC CGCCGGCCAC CACCCCGGAC 
CCGTGGTGGC GCCAGGCCGT CGTCTACCAG GTCTACCCGC GCAGCTTCGC GGACTCGAAC
GGCGACGGCA CCGGCGACCT GCCCGGCATC ACCGCCCGGG TCCCGCACCT GGTCTCCCTC
GGGGTCGACG CCGTGTGGCT CTCCCCCTTC TACCCCTCCG CCCTGGCCGA CGGGGGCTAC
GACGTCGACG ACCACCGCGA CGTCGACCCC GCCATCGGCA CCCTGGAGCA GTTCGACGAG
ATGGTCGCCA CCCTGCACGC CGCGGGGATC AAGGTCGTCG TGGACATCGT GCCCAACCAC
TCCTCGAACC GGCACCGCTG GTTCCGCGAC GCGCTGGCCG CCGGGCCCGG CTCCCCCGAG
CGCGAGCGCT ACGTCTTCGC CCGCGGCCGC GGCGAGCACG GCGAGCTGCC GCCCAGCGAC
TGGACGGCCG TCTTCGGGGG CCCGGCGTGG GAACCCGTCG GCGACGGGGA GTGGTACCTG
CACACCTTCG CCCCCGAGCA GCCGGACTGG AACTGGGACC ACCCCGAGGT GCGCGAGGAC
TTCCTCACCA CGCTGCGCTT CTGGGCCGAC CGCGGGGTCG ACGGGTTCCG CGTCGACGTC
GCCCACGCCC TGGTGAAGGA CATGTCCTCC CCGCTGCCCT CCGCCGCGGA GCTGGCCGCG
GACGACCTGC CCGACGGAGC CCACCGGTTC TGGGACCGCG ACGAGGTCCA CGAGGTCTAC
CGCGCCTGGC GGGCGGTGTT CGACGAGTAC GACCCGCCCC GCACCGCGGT CGCCGAGGCG
TGGGTCGCCA CCCACCGCCG CGCCCGCTAC GCCTCCCCCG AGGGGCTGGG GCAGGCGTTC
AACTTCGACC TGCTGCGTTC CGACTTCGAC GCCGCCTCCT TCCGGCGGAT CGTCGAGGAG
AACCTCCGCC TGGCCGCGGA GTCCGGCACC TCCTCCACCT GGGTCCTGTC CAACCACGAC
GTCGTGCGCC ACGTCAGCCG CTACGGCCTG CCCGACGGGA TGGACGAGGC CGACCGGGCG
CGGTGGCTGC TCAGCGGCGG CACCGACCCC GCCCCCGACC TCGAGCGCGG CGCCCGCCGG
GCCCGGGCGG CGACGGCGTT CCTGCTCGCC CTGCCCGGCA GCGCCTACCT GTACCAGGGC
GAGGAGCTGG GGCTGCCCGA GGTCGCCGAC CTCGACGCCG CGGTGCTGCA GGACCCGACC
TGGCTGCGCT CCGGCCACGT CGACAAGGGC CGCGACGGCT GCCGCGTCCC GCTGCCCTGG
ACCGCGGAGG GCCCCTCCCA CGGCTTCGGC CCCGGCCCCT CCCACCTGCC GCAGCCGTCC
TGGTTCGCCG CCCACGCCGC CGACGTCCAG GACCGCGACC CCCGCTCGAC GCTCTCCGCC
TACCGCGAGG CGCTGGCCTG GCGGCGGCGG CTGCGCACCG GCGAGGAACT GGTGTTCGAG
GACGCCCCCG AGGGCGTCGT GCGGTTCCGC CGCCCCGGCG GCTGGACCTG CGTCACGAAC
TTCACCACCC GCGCCGTCCC GCTGCCCCCC GGGCGGGTGG TGCTCTCCAG CGGGGCGCCG
GCCGACGAGC TGGACGGCGA GCTGCCTGGG GAGACGACCG TCTGGCTGCT GCCGGCGGAC
TGA
 
Protein sequence
MSDLLDHATT PSSPPATTPD PWWRQAVVYQ VYPRSFADSN GDGTGDLPGI TARVPHLVSL 
GVDAVWLSPF YPSALADGGY DVDDHRDVDP AIGTLEQFDE MVATLHAAGI KVVVDIVPNH
SSNRHRWFRD ALAAGPGSPE RERYVFARGR GEHGELPPSD WTAVFGGPAW EPVGDGEWYL
HTFAPEQPDW NWDHPEVRED FLTTLRFWAD RGVDGFRVDV AHALVKDMSS PLPSAAELAA
DDLPDGAHRF WDRDEVHEVY RAWRAVFDEY DPPRTAVAEA WVATHRRARY ASPEGLGQAF
NFDLLRSDFD AASFRRIVEE NLRLAAESGT SSTWVLSNHD VVRHVSRYGL PDGMDEADRA
RWLLSGGTDP APDLERGARR ARAATAFLLA LPGSAYLYQG EELGLPEVAD LDAAVLQDPT
WLRSGHVDKG RDGCRVPLPW TAEGPSHGFG PGPSHLPQPS WFAAHAADVQ DRDPRSTLSA
YREALAWRRR LRTGEELVFE DAPEGVVRFR RPGGWTCVTN FTTRAVPLPP GRVVLSSGAP
ADELDGELPG ETTVWLLPAD