Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3300 |
Symbol | |
ID | 5333617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 3677571 |
End bp | 3679253 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | alpha amylase catalytic region |
Protein accession | YP_001363028 |
Protein GI | 152967244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.522775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.208807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGACC TCCTCGACCA CGCCACCACC CCCTCCTCGC CGCCGGCCAC CACCCCGGAC CCGTGGTGGC GCCAGGCCGT CGTCTACCAG GTCTACCCGC GCAGCTTCGC GGACTCGAAC GGCGACGGCA CCGGCGACCT GCCCGGCATC ACCGCCCGGG TCCCGCACCT GGTCTCCCTC GGGGTCGACG CCGTGTGGCT CTCCCCCTTC TACCCCTCCG CCCTGGCCGA CGGGGGCTAC GACGTCGACG ACCACCGCGA CGTCGACCCC GCCATCGGCA CCCTGGAGCA GTTCGACGAG ATGGTCGCCA CCCTGCACGC CGCGGGGATC AAGGTCGTCG TGGACATCGT GCCCAACCAC TCCTCGAACC GGCACCGCTG GTTCCGCGAC GCGCTGGCCG CCGGGCCCGG CTCCCCCGAG CGCGAGCGCT ACGTCTTCGC CCGCGGCCGC GGCGAGCACG GCGAGCTGCC GCCCAGCGAC TGGACGGCCG TCTTCGGGGG CCCGGCGTGG GAACCCGTCG GCGACGGGGA GTGGTACCTG CACACCTTCG CCCCCGAGCA GCCGGACTGG AACTGGGACC ACCCCGAGGT GCGCGAGGAC TTCCTCACCA CGCTGCGCTT CTGGGCCGAC CGCGGGGTCG ACGGGTTCCG CGTCGACGTC GCCCACGCCC TGGTGAAGGA CATGTCCTCC CCGCTGCCCT CCGCCGCGGA GCTGGCCGCG GACGACCTGC CCGACGGAGC CCACCGGTTC TGGGACCGCG ACGAGGTCCA CGAGGTCTAC CGCGCCTGGC GGGCGGTGTT CGACGAGTAC GACCCGCCCC GCACCGCGGT CGCCGAGGCG TGGGTCGCCA CCCACCGCCG CGCCCGCTAC GCCTCCCCCG AGGGGCTGGG GCAGGCGTTC AACTTCGACC TGCTGCGTTC CGACTTCGAC GCCGCCTCCT TCCGGCGGAT CGTCGAGGAG AACCTCCGCC TGGCCGCGGA GTCCGGCACC TCCTCCACCT GGGTCCTGTC CAACCACGAC GTCGTGCGCC ACGTCAGCCG CTACGGCCTG CCCGACGGGA TGGACGAGGC CGACCGGGCG CGGTGGCTGC TCAGCGGCGG CACCGACCCC GCCCCCGACC TCGAGCGCGG CGCCCGCCGG GCCCGGGCGG CGACGGCGTT CCTGCTCGCC CTGCCCGGCA GCGCCTACCT GTACCAGGGC GAGGAGCTGG GGCTGCCCGA GGTCGCCGAC CTCGACGCCG CGGTGCTGCA GGACCCGACC TGGCTGCGCT CCGGCCACGT CGACAAGGGC CGCGACGGCT GCCGCGTCCC GCTGCCCTGG ACCGCGGAGG GCCCCTCCCA CGGCTTCGGC CCCGGCCCCT CCCACCTGCC GCAGCCGTCC TGGTTCGCCG CCCACGCCGC CGACGTCCAG GACCGCGACC CCCGCTCGAC GCTCTCCGCC TACCGCGAGG CGCTGGCCTG GCGGCGGCGG CTGCGCACCG GCGAGGAACT GGTGTTCGAG GACGCCCCCG AGGGCGTCGT GCGGTTCCGC CGCCCCGGCG GCTGGACCTG CGTCACGAAC TTCACCACCC GCGCCGTCCC GCTGCCCCCC GGGCGGGTGG TGCTCTCCAG CGGGGCGCCG GCCGACGAGC TGGACGGCGA GCTGCCTGGG GAGACGACCG TCTGGCTGCT GCCGGCGGAC TGA
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Protein sequence | MSDLLDHATT PSSPPATTPD PWWRQAVVYQ VYPRSFADSN GDGTGDLPGI TARVPHLVSL GVDAVWLSPF YPSALADGGY DVDDHRDVDP AIGTLEQFDE MVATLHAAGI KVVVDIVPNH SSNRHRWFRD ALAAGPGSPE RERYVFARGR GEHGELPPSD WTAVFGGPAW EPVGDGEWYL HTFAPEQPDW NWDHPEVRED FLTTLRFWAD RGVDGFRVDV AHALVKDMSS PLPSAAELAA DDLPDGAHRF WDRDEVHEVY RAWRAVFDEY DPPRTAVAEA WVATHRRARY ASPEGLGQAF NFDLLRSDFD AASFRRIVEE NLRLAAESGT SSTWVLSNHD VVRHVSRYGL PDGMDEADRA RWLLSGGTDP APDLERGARR ARAATAFLLA LPGSAYLYQG EELGLPEVAD LDAAVLQDPT WLRSGHVDKG RDGCRVPLPW TAEGPSHGFG PGPSHLPQPS WFAAHAADVQ DRDPRSTLSA YREALAWRRR LRTGEELVFE DAPEGVVRFR RPGGWTCVTN FTTRAVPLPP GRVVLSSGAP ADELDGELPG ETTVWLLPAD
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