| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3279 |
|---|
| Symbol | |
|---|
| ID | 5333503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 3704119 |
|---|
| End bp | 3705975 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | 2-oxoglutarate dehydrogenase E2 component |
|---|
| Protein accession | YP_001363007 |
|---|
| Protein GI | 152967223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.191519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACT CGGTGCAGAT GCCGGCTCTC GGCGAGAGCG TGACCGAGGG CACCGTCACC
CGGTGGCTCA AGGCGGTCGG CGACACCGTC GAGGTGGACG AACCCCTCCT GGAGGTGTCC
ACCGACAAGG TCGACACCGA GATCCCCTCC CCCGTCGCCG GCACCCTGCT GGAGATCCTC
GTCCCCGAGG ACGAGACCGC CGACGTCGGC GCCGACCTGG CCCGCATCGG CGACCCGAGC
GAGCAGGGCG GCGGGTCCCC CGCGCCGCAG GAGCAGCCGG CCCCGGCCGC GCCGCAGGAC
GCCCCGGCCC CGCCGTCCAC CGAGGACACG CAGGCCGCCC CGCAGGCGGC GCAGGAGCCC
TCTCCCGAGG AGCCCCCCGC GGCCGCCGCG GCTCCCGCCC CCGGCGGGGG CGAGGCCGTG
AAGATGCCCG CGCTCGGGGA GTCCGTCACC GAGGGCACCG TCACCCGCTG GCTCAAGGCC
GTCGGCGACA GCGTCGAGGT CGACGAGCCG CTGCTGGAGG TGTCCACCGA CAAGGTCGAC
ACCGAGATCC CCTCCCCCGT CGCCGGCACC CTGCTGGAGA TCCTGGTGGG CGAGGACGAG
ACCGCCGACG TCGGCGCGGA CCTGGCCCGC ATCGGCGACG CCTCCGCCGC CCCGTCGCCG
GCTCCGGCCG CCCCCGCCCA GGAGGCTCCC GCTGCGCCGC AGGAGGAGTC GCTGGCCGAC
GAGGTGGCCG AGCGGGAGAC CGCCCGGGCC CAGGCCGAGA GCGCCACCCA GCCGTCCTCG
ACCCCCAGCG CGGAACCCGC CTCCGCCCCC GCGCAGCCGG TCGCGCCGGC TCCCGCCCCC
GCTGCGCCCG CGCCGCAGGC TCCGGCGAGC ACCCCGGCCC CGGCCGAGGT CACCGGCGGC
GGCACCTACG TCACCCCCCT GGTGCGCAAG CTGGCCAAGG ACCTCGGCGT GGACCTCGCC
ACCGTCACCG GCACCGGTGT CGGCGGCCGG GTGCGCAAGC AGGACGTGCA GGAGGCCGCG
GACAAGGCGG CGGAGGCCGC CAGGGCCGCT GAGGCGAAGG CCGCCGAGGC CGCCGCCCCG
GCTCCGGCCG CGGCCGCCGA GAAGCCCGCC GCCAAGCCCG CTCCGGCCGT GGAGGTCTCG
GCCAAGCGCG GCACGACGGA GAAGATGTCG CGGCTGCGCA AGGTCATCGC CCAGCGGATG
AAGGAGTCGC TGCAGAACTC CGCGCAGCTG ACCACCGTCA TCGAGGTCGA CGTCACGAAG
ATCGCGCGCC TGCGGGCGCG GGCCAAGGAC GGCTTCCTCG CGACCGAGGG TGCGAAGCTG
ACCTTCCTGC CGTTCTTCGT CAAGGCCGCG GTCGAGGCGC TCAAGCAGCA CCCCTCGCTC
AACGCCAGCA TCGACGGCGA GAACATCGTC TACCACGGCA GCGAGAACGT CTCGATGGCC
GTGGACACCC CCAAGGGCCT CATCACCCCG GTCATCAAGG ACGCCGGGGA CCTGAACCTC
GGCGGGCTGG CCCGCAAGAT CGCCGACCTG GCCGCCCGCA CCCGGGCCAG CAAGATCACC
CCCGACGACC TGTCCGGGGG CACCTTCACC ATCACCAACA CCGGCAGCAT CGGGGCCCTG
TTCGACACCC CGATCCTCAA CGCGCCCCAG GTCGCCATCC TCGGGACCGG CGCGATCGTC
AAGCGTCCCG TCGTCCTCGA GGTCGACGGG CAGGAGACCA TCGCGATCCG CTCGATGATG
TACCTGGCGC TGTCCTACGA CCACCAGATC GTCGACGGCG CCGACGCGGC CCGCTTCCTG
CAGACCGTCA AGAAGCGCAT CGAAGCCGGC GAGTTCGAGG GCGAGCTCGG TCTCTGA
|
|---|
| Protein sequence | MSNSVQMPAL GESVTEGTVT RWLKAVGDTV EVDEPLLEVS TDKVDTEIPS PVAGTLLEIL
VPEDETADVG ADLARIGDPS EQGGGSPAPQ EQPAPAAPQD APAPPSTEDT QAAPQAAQEP
SPEEPPAAAA APAPGGGEAV KMPALGESVT EGTVTRWLKA VGDSVEVDEP LLEVSTDKVD
TEIPSPVAGT LLEILVGEDE TADVGADLAR IGDASAAPSP APAAPAQEAP AAPQEESLAD
EVAERETARA QAESATQPSS TPSAEPASAP AQPVAPAPAP AAPAPQAPAS TPAPAEVTGG
GTYVTPLVRK LAKDLGVDLA TVTGTGVGGR VRKQDVQEAA DKAAEAARAA EAKAAEAAAP
APAAAAEKPA AKPAPAVEVS AKRGTTEKMS RLRKVIAQRM KESLQNSAQL TTVIEVDVTK
IARLRARAKD GFLATEGAKL TFLPFFVKAA VEALKQHPSL NASIDGENIV YHGSENVSMA
VDTPKGLITP VIKDAGDLNL GGLARKIADL AARTRASKIT PDDLSGGTFT ITNTGSIGAL
FDTPILNAPQ VAILGTGAIV KRPVVLEVDG QETIAIRSMM YLALSYDHQI VDGADAARFL
QTVKKRIEAG EFEGELGL
|
|---|
| |