Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3233 |
Symbol | |
ID | 5336115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3753554 |
End bp | 3754954 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001362961 |
Protein GI | 152967177 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.410255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0739839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCACTC CCACGACGAC GAGTCCCCTC TCGTCGGGCC AGTCGAGCAT CACGTGGCCC GACCTCCCCG CCGCCCAGCA GCCGCAGTGG CCGGACGCCG CGGCGCTGGC CGAGGTGCAG GCGGAGCTCG CGTCGTATCC TCCGCTGGTG TTCGCCGGGG AGGCGGACCA GCTGCGCGCG CAGCTGGCGA AGGCCGCCCG CGGCGAGGCG TTCCTGCTGC AGGGCGGGGA CTGCGCCGAG ACCTTCGCCG GCGCGACGGC CGACGGCATC CGCCGCCGGC TGAAGACGAT GCTGCAGATG TCCGCGGTCC TCACCTACGG CGCGAGCCTG CCCGTCATCA AGGTCGGCCG GATGGCGGGG CAGTTCTCCA AGCCCCGCTC CAGCAACGAC GAGACCCGCG ACGGCGTCAC GCTGCCCGCC TACCGCGGCG ACGCCGTCAA CGACTACGCG TTCACGCCCG AGTCCCGCGT CCCGGACCCG CAGCGGCTGC TGCGCGCGTA CCACACGTCC TCGGCGACGC TGAACCTCAT CCGGGCGTTC ACCACCGGCG GGTACGCCGA CCTGCGCAAG GTCCACGAGT GGAACCGCGG GTTCGCGGCC ACCGCGGCCA ACGCGAAGTA CGACTCCCTG GCCCGCGACA TCGACAAGGC CATGCGGTTC ATGGCCGCCT GCGGCGCCGA CTTCGACGCG CTGCAGACGG TGCAGTTCTG GTCCAGCCAC GAGGCGCTGC TGCTGGACTA CGAACGTCCG CTGACCCGCA CCCTCGACGA GGAACCCCCG CTGGCCGGCG CCGCGCCGGA CGACGTGCGC CAGGGCGGCC CGTACGACGT GGCCGCGCAC ATGGTGTGGA TCGGGGAGCG CACCCGGCAG CTCGACGGCG CCCACGTCGA CTTCGCCGCC CGGATCCGCA ACCCGATCGG GATCAAGCTG GGGCCGAAGA CCTCCGTCGA CGACGCCCTC GCGCTCATCG ACAAGGTCGA CCCCTACCGC GAGCCGGGCC GGTTGACCTT CATCACCCGC ATGGGCGCCT CGACGATCCG CGAGGCCCTG CCCGCTCTCG TCGAGGGCGT CACGCGCTCC GGCGCCCAGG TCACCTGGGT CTGCGACCCC ATGCACGGCA ACACGATCAC CTCGACCAGC GGGTACAAGA CCCGCCGGTT CGACGACGTC GTGGACGAGG TCCGCGGCTT CTTCGAGGTG CACCGCGCGC TGGGCACCGT CCCCGGCGGC CTGCACGTCG AGCTCACCGG GGACGACGTC ACCGAGTGCC TCGGCGGGGC CTACGACATC GACGACGCGG CGCTGGCGAC CCGCTACGAG TCGCTGTGCG ACCCGCGGCT GAACCACCAG CAGTCCCTGG AGCTGGCGTT CCTCGCCGCG GAGATGCTCG CCGAGCGCTG A
|
Protein sequence | MSTPTTTSPL SSGQSSITWP DLPAAQQPQW PDAAALAEVQ AELASYPPLV FAGEADQLRA QLAKAARGEA FLLQGGDCAE TFAGATADGI RRRLKTMLQM SAVLTYGASL PVIKVGRMAG QFSKPRSSND ETRDGVTLPA YRGDAVNDYA FTPESRVPDP QRLLRAYHTS SATLNLIRAF TTGGYADLRK VHEWNRGFAA TAANAKYDSL ARDIDKAMRF MAACGADFDA LQTVQFWSSH EALLLDYERP LTRTLDEEPP LAGAAPDDVR QGGPYDVAAH MVWIGERTRQ LDGAHVDFAA RIRNPIGIKL GPKTSVDDAL ALIDKVDPYR EPGRLTFITR MGASTIREAL PALVEGVTRS GAQVTWVCDP MHGNTITSTS GYKTRRFDDV VDEVRGFFEV HRALGTVPGG LHVELTGDDV TECLGGAYDI DDAALATRYE SLCDPRLNHQ QSLELAFLAA EMLAER
|
| |