Gene Krad_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3231 
Symbol 
ID5335305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3756929 
End bp3758101 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content77% 
IMG OID 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_001362959 
Protein GI152967175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0309569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG ACCACGACCC GACGGACGCA CCCGAGAAGA CCGGCGAGCG CTCCCGGCGG 
GGCCGCTGGC TGGCCGCCGC CCTCGTCGGC GCCGCCGCCC CCACCGCCCT CGTGCCCGCC
GCCCAGGCCG CGCCGGCCGC CGCGCACGCC GCGAGCCCCG AGGACACCGT CACCGTCCGG
GCCGGCGACA CCGTCGGCGG CATCGCCCGC CGCGCCGGCA CGACCGTCGA GGCGATCGTC
GAGGCCAACG GCCTCGACGG GAACGCGCAG ATCGTGGAGG GGCAGCAGCT GCGGGTGCCG
CGGCCCGCGG CCGACGGCGG CCCCGCGGGA GCCCCGGCCG GCGGCACCCA CACCGTCCGG
GCCGGGGAGA CCCTCAGCGG CATCGCGCTG ACCCGGGGCA CGACGGTCGC GGCGCTGCGC
GAGGCCAACG GCCTGAGCGC CGACGGGTTC ATCCGCGAGG GCCAGGAGCT CACCCTGCCC
GGCGGGACGG GCGGCGGCTC CCAGGCGAAG ACCGGCGGCG CGGCCGGGGA CGCCACGTAC
ACCGTCCGCG CCGGGGACAC GCTGTCGCAC ATCGCGCTCT CGACCGGGGT CGGGGTCGAG
GACCTCGTCG CGCTCAACGG CCTCGACGAC ACCGGCTTCA TCGTCGAGGG CCAGCAGCTG
CGCCTCGGCC GGCCACCGGC CGCGAGCACC CCGGCCCGGC CCGCGACGCC CGCGCCCACG
CGGGCCGCCA CGGTCAGCGA GGCCGTGGAG GTCAACCGCG CCCGGATCCA GGCCTCCTCC
CAGCCCGGGC GGGAGGAGAT GCGCGAGATC ATCCGCTCCA CCGCCGTGAA GCTCGGGGTG
GACCCGTCCC TGGCCCTGGC CATCGGCTAC CAGGAGTCCG GCTTCAACAT GAAGGTCGTC
TCCCACGCCA ACGCCATCGG GGCGATGCAG GTCATCCCCA GCTCCGGGGA GTGGGCCTCG
GACCTGCTGG GACAGCCCAT CGACCTCTTC GACGCCCGCG ACAACGCCCG GGCCGGGGTC
GCGATCCTGC GCACGCTGGT GGCGAACAAC CCCCCGGACG TCGCGATCGC CTCGTACTAC
CAGGGCCAGG CGTCGGTGCG CTCGCGCGGG ATGTACGACG ACACGCGACG CTACGTGGCG
AACGTGCAGA CGCTGCAGGC GCGCTTCAGC TGA
 
Protein sequence
MADDHDPTDA PEKTGERSRR GRWLAAALVG AAAPTALVPA AQAAPAAAHA ASPEDTVTVR 
AGDTVGGIAR RAGTTVEAIV EANGLDGNAQ IVEGQQLRVP RPAADGGPAG APAGGTHTVR
AGETLSGIAL TRGTTVAALR EANGLSADGF IREGQELTLP GGTGGGSQAK TGGAAGDATY
TVRAGDTLSH IALSTGVGVE DLVALNGLDD TGFIVEGQQL RLGRPPAAST PARPATPAPT
RAATVSEAVE VNRARIQASS QPGREEMREI IRSTAVKLGV DPSLALAIGY QESGFNMKVV
SHANAIGAMQ VIPSSGEWAS DLLGQPIDLF DARDNARAGV AILRTLVANN PPDVAIASYY
QGQASVRSRG MYDDTRRYVA NVQTLQARFS