Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3231 |
Symbol | |
ID | 5335305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 3756929 |
End bp | 3758101 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_001362959 |
Protein GI | 152967175 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0309569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACG ACCACGACCC GACGGACGCA CCCGAGAAGA CCGGCGAGCG CTCCCGGCGG GGCCGCTGGC TGGCCGCCGC CCTCGTCGGC GCCGCCGCCC CCACCGCCCT CGTGCCCGCC GCCCAGGCCG CGCCGGCCGC CGCGCACGCC GCGAGCCCCG AGGACACCGT CACCGTCCGG GCCGGCGACA CCGTCGGCGG CATCGCCCGC CGCGCCGGCA CGACCGTCGA GGCGATCGTC GAGGCCAACG GCCTCGACGG GAACGCGCAG ATCGTGGAGG GGCAGCAGCT GCGGGTGCCG CGGCCCGCGG CCGACGGCGG CCCCGCGGGA GCCCCGGCCG GCGGCACCCA CACCGTCCGG GCCGGGGAGA CCCTCAGCGG CATCGCGCTG ACCCGGGGCA CGACGGTCGC GGCGCTGCGC GAGGCCAACG GCCTGAGCGC CGACGGGTTC ATCCGCGAGG GCCAGGAGCT CACCCTGCCC GGCGGGACGG GCGGCGGCTC CCAGGCGAAG ACCGGCGGCG CGGCCGGGGA CGCCACGTAC ACCGTCCGCG CCGGGGACAC GCTGTCGCAC ATCGCGCTCT CGACCGGGGT CGGGGTCGAG GACCTCGTCG CGCTCAACGG CCTCGACGAC ACCGGCTTCA TCGTCGAGGG CCAGCAGCTG CGCCTCGGCC GGCCACCGGC CGCGAGCACC CCGGCCCGGC CCGCGACGCC CGCGCCCACG CGGGCCGCCA CGGTCAGCGA GGCCGTGGAG GTCAACCGCG CCCGGATCCA GGCCTCCTCC CAGCCCGGGC GGGAGGAGAT GCGCGAGATC ATCCGCTCCA CCGCCGTGAA GCTCGGGGTG GACCCGTCCC TGGCCCTGGC CATCGGCTAC CAGGAGTCCG GCTTCAACAT GAAGGTCGTC TCCCACGCCA ACGCCATCGG GGCGATGCAG GTCATCCCCA GCTCCGGGGA GTGGGCCTCG GACCTGCTGG GACAGCCCAT CGACCTCTTC GACGCCCGCG ACAACGCCCG GGCCGGGGTC GCGATCCTGC GCACGCTGGT GGCGAACAAC CCCCCGGACG TCGCGATCGC CTCGTACTAC CAGGGCCAGG CGTCGGTGCG CTCGCGCGGG ATGTACGACG ACACGCGACG CTACGTGGCG AACGTGCAGA CGCTGCAGGC GCGCTTCAGC TGA
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Protein sequence | MADDHDPTDA PEKTGERSRR GRWLAAALVG AAAPTALVPA AQAAPAAAHA ASPEDTVTVR AGDTVGGIAR RAGTTVEAIV EANGLDGNAQ IVEGQQLRVP RPAADGGPAG APAGGTHTVR AGETLSGIAL TRGTTVAALR EANGLSADGF IREGQELTLP GGTGGGSQAK TGGAAGDATY TVRAGDTLSH IALSTGVGVE DLVALNGLDD TGFIVEGQQL RLGRPPAAST PARPATPAPT RAATVSEAVE VNRARIQASS QPGREEMREI IRSTAVKLGV DPSLALAIGY QESGFNMKVV SHANAIGAMQ VIPSSGEWAS DLLGQPIDLF DARDNARAGV AILRTLVANN PPDVAIASYY QGQASVRSRG MYDDTRRYVA NVQTLQARFS
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