Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3225 |
Symbol | |
ID | 5336255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 3763090 |
End bp | 3764517 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | Zeta-phytoene desaturase |
Protein accession | YP_001362953 |
Protein GI | 152967169 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.328594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00724213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGTCCGTCG CCGCGCGCCT GGCCGCCCTC GGTCACCGGG TGGAGGTCTT CGAGCAGTCC GAGGAGATCG GGGGCAAGCT CGGCTGGTTC AGCCGGGACG GCTTCTCCTT CGACACCGGG CCCTCCCTGC TGACGCTGCC CGCGGTCCAG CGCGACCTGT TCCTCAAGAC CGGCGACCCG ATCGAGTCGG TCCTCGACGT GGTGGCGCTG GACCCGGTCG CGCACTACCG CTTCGCCGAC GGCACCGAGG TCGACCTGCC CGGGGGCGGG CTGCCGCGGG TGGCCCGCGC CCTGGACGAG GCGCTGGGAG CGGGCACGGG CGCGCAGTGG ACGGCGTTCC AGCGGCGCGC GGCGGCGATC TGGGACGTGG CGCGCGAACC GTTCCTGGAG TCGCCGCTGG ACGGCCCGCG GACGCTGCTG CGCCTGGCCC GCAGCGCCTC CGACGTCGCC ACCGTCGCCC CGTGGTCCAG CCTGCGCGGC CTCGGCCGGC GCTACCTCGA CGACCCCCGG TTGCGGACGC TGCTGGACCG CTACGCGACG TACTCCGGCT CGCACCCGGC GAAGGCCCCC GCCGCCCTGG CGACGGTGCC CTTCGTCGAG CAGGCCTTCG GCGCCTGGTA CGTCCGCGGG GGCCTGCACC GGCTCGCCGA GGCCGTGGCC GACCGCGCCG GCGAGCACGG GGTGCGGATC CGCACCGGCA CCCCGGTCAC CGCCGTCCTG GCCGAGCACG GCCGCGCCGA GGGCGTCCGG CTCGCCGACG GCACCGAGGT CCGCGCCGAC GTCGTCGTCT CCGCCGTCGA CGCCGCCCGC CTCTACGGGG ACCTGCTGCC GCGGCCCCGG TTGCGCCCGC GCCCCTCGCG CCGCTCCACG TCGGGCTTCG TGCTGCTGCT GGCCCTGGAC GGGCGGACGC CGGGGCTGCG GCACCACACC GTGCTGTTCC CCGACGACTA CGACGCGGAG TTCGCCGACC TCGCCGCGGG CCGGCCGGTG GCCGACCCGA CGGTCTACGT CAGCGCGCCC GACGACCCCG CGCTGCGGCC CGACGAGGAC TCCGAGGCCT GGTTCGTGCT GGTCAACGCC CCCGTCCACG ACCCGCGGCG GGGCACCGAC TGGCGCTCGC CCGACCTGGT CGAGCGGCAC GCCCGGACGG TGCTGGACAC GATGGCCGCG CGGGGCCTGG ACGTGCGGGA CCGGCTGCGC TGGAGCGAAG TCCGCACCCC GGCGGACCTG GAGGAGCGGA CCGGCAGCGA CGGGGGGGCG ATCTACGGCA GTTCCAGCGA CGGGGCCCGC TCGGCGTTCC TGCGCCCGGC CAACCGCTCC CCCGTGCCGG GGTTGTTCCT CGTCGGCGGC AGCGCCCACC CCGGGGGCGG GCTGCCGCTG GTCGGGTTGT CCGCGCGCAT CGTCACCGAC CTGATCGGTC CCGCCTGA
|
Protein sequence | MSVAARLAAL GHRVEVFEQS EEIGGKLGWF SRDGFSFDTG PSLLTLPAVQ RDLFLKTGDP IESVLDVVAL DPVAHYRFAD GTEVDLPGGG LPRVARALDE ALGAGTGAQW TAFQRRAAAI WDVAREPFLE SPLDGPRTLL RLARSASDVA TVAPWSSLRG LGRRYLDDPR LRTLLDRYAT YSGSHPAKAP AALATVPFVE QAFGAWYVRG GLHRLAEAVA DRAGEHGVRI RTGTPVTAVL AEHGRAEGVR LADGTEVRAD VVVSAVDAAR LYGDLLPRPR LRPRPSRRST SGFVLLLALD GRTPGLRHHT VLFPDDYDAE FADLAAGRPV ADPTVYVSAP DDPALRPDED SEAWFVLVNA PVHDPRRGTD WRSPDLVERH ARTVLDTMAA RGLDVRDRLR WSEVRTPADL EERTGSDGGA IYGSSSDGAR SAFLRPANRS PVPGLFLVGG SAHPGGGLPL VGLSARIVTD LIGPA
|
| |