| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3107 |
|---|
| Symbol | |
|---|
| ID | 5335121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 3893920 |
|---|
| End bp | 3894540 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_001362835 |
|---|
| Protein GI | 152967051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.921082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0263435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGCCCG TGAACCCCCG GCCCGACCCG TCACCGTCAC GGGCGGCAGC CGCCTGGACC
GACCCGGCGT CGTGGGACGA CGCCGCGGTC GGCCGGGCGC TGGCCGCCGG GGACGAGCGC
GCCCTGCGGG AGGCGTTCAC CCGCTGGGCC CCGCTGGTCA ACGGCCTCGC CCGGCGCCGG
CTGGAGGAGA CCGACGCCCA GGACGTGGTG CAGGCGGTCT TCGTCTCGGC CTGGCGCTCG
CGGGAGCGCT TCGACCCCGA GCGGTCCTCG CTCCCGGCGT GGCTGGTGGG CATCGCCCGC
CACCGCATCG CCGACGCCCT CACCACCCGC TACCGGCCCG AGGTCCTCAC CGACCCCGAG
CAGCTGCACG GCGGGGACGC CACCGTGGTG CTGGAGCCCG CGCCGCAGGA CACCGCGACC
GACCGCGTGG TCCTGCTCGC CGAGGTGGAC GAGCTCGGGG AACCCCAGCG CACCCTCGTG
CGGATGGCGT TCTTCGAGGA CCTGACCCAG ACGCAGATCG CCGAACGCAC CGGTCTGCCC
GTGGGTACCG TGAAGAGCCA CCTCCGGCGG TCCCTGCGCC GGTTGCGTTC GCGCCTGGAG
GACGACCGTG CCGATGGATG A
|
|---|
| Protein sequence | MGPVNPRPDP SPSRAAAAWT DPASWDDAAV GRALAAGDER ALREAFTRWA PLVNGLARRR
LEETDAQDVV QAVFVSAWRS RERFDPERSS LPAWLVGIAR HRIADALTTR YRPEVLTDPE
QLHGGDATVV LEPAPQDTAT DRVVLLAEVD ELGEPQRTLV RMAFFEDLTQ TQIAERTGLP
VGTVKSHLRR SLRRLRSRLE DDRADG
|
|---|
| |