| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3104 |
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| Symbol | |
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| ID | 5335194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | + |
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| Start bp | 3896333 |
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| End bp | 3900499 |
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| Gene Length | 4167 bp |
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| Protein Length | 1388 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001362832 |
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| Protein GI | 152967048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.623202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0104399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGGT CCTCCCAGCG GCGTTCCCGC CCCGCCTCCC GCACCCCCGT CCGCTCCCGC
CCGGGCTCCG CCCCCGGGGC GCTGCCCGCC GACCCGCGCG CCAGCGCCCT CGCCGAGCGG
CTGCGCGCGG TCTCCCTGCG CGACGAGGAC CGCCTCCGCC GCCGGCTGGC GGGCCTGGCC
CGGCGCCCGG TGGAGGCCTT CGAGGAGGAG CTGCCCGCCC TGGAGCAGCA GACGGTCGCC
GCCGAGCAGC GGGTGACCGC CCGCGCCGCG AGCGTCCCCG CCCTGCGCTA CCCGGAGCAG
CTGCCGGTCA GCCAGGAGAA GGACCGCATC GCCGCCGCGC TGCGCGACCA CCAGGTGATC
GTCGTCGCCG GCGAGACCGG GTCGGGCAAG ACGACGCAGC TGCCGAAGAT CTGCCTGGAG
ATCGGCCGCG GGCTGCGCGG GCGGATCGGG CACACCCAGC CCCGGCGGAT CGCCGCGCGC
GCGGTGGCCG AACGCGTCGC CGAGGAGCTC GGCACCGAGC TGGGCGGCAG CGTCGGCTAC
GCCGTGCGCT TCACCGACAC CGTCGGCGAG GACAGCCTCG TCAAGGTCAT GACCGACGGG
ATCCTGCTGG CCGAGATCCA GCGCGACCCC GAACTGCTCC AGTACGACAC CCTCATCATC
GACGAGGCCC ACGAGCGCAG CCTGACCATC GACTTCCTGC TCGGCTACCT CGCCCGGCTG
CTGCCGCGCC GGCCCGAGCT GAAGCTCGTC ATCACCTCCG CGACGATCGA CCCCGAGCGG
TTCTCCCGCC ACTTCGGCGG GGCGCCGATC CTCGAGGTCT CCGGGCGCAC CTACCCCGTG
GAGGTGCGCT ACCGCCCGCT GCTGGCGGCC GAGCTCGCCG AGGAGCTGCT CGGCCCCGCC
GACGAGGAGG AGGGCGACGC CCTCGACGAG CGCGACGACC TCGTCGGCGA CGACCGCGAC
CAGACCGAGG GCATCCTCGA CGCCGTGCGC GAGCTCGCCG CCGAGGGACC CGGCGACGTC
CTGGTGTTCC TGCCCGGCGA GCGGGAGATC CGCGACACCG CCGACGCGCT CGCGGACCTG
GTCAAGGAGC GCGGGTTCCG CGGCACGGAG ATCCTCCCGC TGTTCGCCCG GCTGTCCGCC
GAGGAGCAGC ACCGCGTGTT CCGGACCGCC GCCCACCGCC GGATCGTGCT GGCCACCAAC
GTCGCCGAGA CCTCGCTGAC CGTCCCCGGC ATCCGCTACG TCGTGGACGC CGGGACCGCG
CGGATCTCCC GCTACAGCCA CCGCACGAAG GTGCAGCGGC TGCCCATCGA GCGGATCTCG
CAGGCCTCGG CCAACCAGCG GGCCGGCCGC TGCGGCCGAG TCGCCGACGG CATCTGCATC
CGGCTCTACT CCCAGAGCGA CTTCGAGTCG CGCCCGGAGT TCACCGACCC CGAGATCCTG
CGGACCAACC TCGCCGCGGT CATCCTGCAG ATGACCTCCC TCGGGCTCGG CGACATCGCC
GCGTTCCCGT TCGTCGAACC CCCCGAGCCG CGCGCGATCA CCGACGGCCT CGCCCTGCTG
GCCGAGCTCG GCGCGCTGGA GGACGCCCGC CCGGGCGACC GCGGCGTCCC CCGCCTGACC
CCCACCGGGC GCGACCTCGC CCGGCTGCCC ATCGACCCGC GGCTGGGGCG GATGGTGCTG
GAGGCCCAGC GCAACGGCTG CCTGCACGAC GTCCTCGTCG TCGTGGCGGC GCTGTCGGTG
CAGGACCCGC GCGAACGCCC GCTGGAGAAG CGCGAGCAGG CCGCGCAGCT GCACGCGCGG
TTCCGCCACG AGCAGTCCGA CTTCCTCACC TACCTCAACC TGTGGTCCTA CCTGCAGCAC
CTGCAGCGCG ACCTGTCCTC CTCGGCGTTC CGCCGCCGGG TCAAGGCCGA GATGCTGCAC
TTCCTGCGGA TCCGGGAGTG GCAGGACACC TATTCCCAGC TGCGCCGGGT GACCCGGGAC
CTGAGGTTCT CCGTCGAGGT CCGCGAACCC GCCGAGCTCG GCGAGGACGA GCTGTTCCCC
GCGCCGGGCT ACGACGCCGA CGCGGTGCAC CGCTCGCTGC TGGCCGGGCT GCTGGGCAAC
ATCGGGCTGA AGGACGTCCG CGAGGACACC GCCAAGGCCG GGGCGAGGAC CGGGGGACGC
CGTGAGAGCC GGCCCACCGG CCGGCAGCAG GTGGAGTACA CCGGCGCCCG GGGGGCGAAG
TTCGCCGTCT CCCCGGGGTC CTCGCTGGGC CGGCGCAGCC CGGACTGGGT CGTGGCGGGC
GAGCTCGTGG AGACGTCGCG GTTGTGGGCG CGCGTCGTCG CCGCCATCGA CCCGCGCTGG
ATCGAGCCGC TGGCCGCGCA CGTCGTGCGG CGCAGCTACT CCGAACCCCG GTGGTCGCGC
AAGCGCGCCG CGGTGATCGC CACCGAGCGC GTCACCCTCT ACGGGGTGCC GATCGTCGCC
GGGCGCAGCG TGCCCTACGG CGGCGTCGAC CCCGAACTGG CCCGCGACCT CTTCATCCGC
CACGCCCTGG TGGAGGGGGA CTTCGAGACC CGGCACGAGT TCTTCCACCG CAACCGGGAA
CTGCTGGCCG AGGCGGAGGA GCTGGAGCAC CGCGCCCGGC GGCGCGACAT CGTCGTCGAC
GACGAGGTGC TCTTCGCCTT CTACGACGCC CGCGTCCCCG CCGACGTCGT CTCCGGCCGC
CACTTCGACG CGTGGTGGAA GGACGAGCGG CGGGTGCGCC CGGACCTGCT GACCTTCGAC
CCGGCGATGC TGGTCACCGA GGACGACGCG GTGAGCGAGG AGCAGTTCCC CCGCGTCTGG
CGCCAGGGGG ACCTGGAGCT GGCCCTGGAC TACGTCTTCG ACCCCGGCTC GCCCGCCGAC
GGCCTGACCG TGGACGTGCC CGTCGAGGTC GTCAACCGCT TCGACGACCG GGACCTGCTG
TGGCAGGTCC CCGGGTTCCG CCACGACCTG GTGACCGCGA TGATCCGGGC GCTGCCCAAG
GAGCTGCGCA AGAACCTCGC CCCGGCGCCC GACAAGGCCG CCCGGTTCCT GGAGCGGGTC
CGGCCCCACG TGGACCGGTT CTGGCCCGCC TTCGAGGCCG AGATGCCCCG GCTGGGCGAC
GGGACGGAGA TCTACGCCGA GGACGTGGAC TGGACGAAGG TCCCCGCCCA CCTGCGCCCC
ACGTTCCGGG TGCTGGCGGG GGACGGGTCG GTCCTGGCCA CCGGCAAGGA CTTCCCCCGG
CTGCGGGCCT CCCTGGAGAC CGCCGTCGTC GAGACCCTCG CCGCCGCCGC CGACGACGTG
CAGCGCACCG GGGCCACCTC GTGGGCCGAC CTGCCCGAGG AGGTCCCCCC GACCCACACC
AGCGTCGTGC GCGGCAGCGA CGTCACGTCC TACCCCGCGC TGGTCGACGA GGGCACCACC
GTCGGCCTGC GGACCTTCCC CGACGCCGCG CGGGCCGCCG TCGCCCACCG CGAGGGGGTG
CTGCGGCTGC TCGTGCTGGC CCTGCCGTCC CCGGCGCGCC GCGTCCAGGA CGCTCTCACC
AACGACGCGA AGCTGCTGCT GGCCCGGGCT CCGCACGCCG ACGCCGGCGC CGTCGTCGCC
GACTGCGCGC AGGCCGCCGC GGCGCAGTTG CTCGACGAGG CCCGCGGCGG CGAGGTCCGC
ACGGCGGGGG AGTTCCGGCG GCTGCTGGAG CGGGTGTCGC CGCGCTACGC CGACCTCACG
GCCACGGCGG TGGAGCGCAC GCTGCGGGTG CTGCGCACCG CGGCCGCGGT GGAGAAGAAC
ATCTCCCGCA CCAGCAGCCT CGCGCTGGTG CCCTCCCTGG CCGACGTCCG CGAGCAGTTC
ACCGGTCTCG TGCACGCGGG GTTCGTCGCC GAGACCGGGG TCGAGCGGCT CCCGGACCTG
CTGCGCTACC TGCAGGGGAT CGACCGCCGG CTGGCGACGA TGCCGGAGAA CCCGCAGCGG
GACCGGGTGC GGATGGCGGA GTTCGCCCGG GTGCGCGAGG AGCACCGGAA GCGGCTGGCG
CGCGCCGGTT CACCGGTCCC CCCGGAGCTG GCGCGGATCC GCTGGACGCT GGAGGAGCTG
CGGCTGCAGA AGTTCGCCCC GGGGATCCCC ACGGCCCACC CGGTCAGCGA CGAGCGCGTG
CTCAAGGCGC TGGCGGAATT CCCCTGA
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| Protein sequence | MSRSSQRRSR PASRTPVRSR PGSAPGALPA DPRASALAER LRAVSLRDED RLRRRLAGLA
RRPVEAFEEE LPALEQQTVA AEQRVTARAA SVPALRYPEQ LPVSQEKDRI AAALRDHQVI
VVAGETGSGK TTQLPKICLE IGRGLRGRIG HTQPRRIAAR AVAERVAEEL GTELGGSVGY
AVRFTDTVGE DSLVKVMTDG ILLAEIQRDP ELLQYDTLII DEAHERSLTI DFLLGYLARL
LPRRPELKLV ITSATIDPER FSRHFGGAPI LEVSGRTYPV EVRYRPLLAA ELAEELLGPA
DEEEGDALDE RDDLVGDDRD QTEGILDAVR ELAAEGPGDV LVFLPGEREI RDTADALADL
VKERGFRGTE ILPLFARLSA EEQHRVFRTA AHRRIVLATN VAETSLTVPG IRYVVDAGTA
RISRYSHRTK VQRLPIERIS QASANQRAGR CGRVADGICI RLYSQSDFES RPEFTDPEIL
RTNLAAVILQ MTSLGLGDIA AFPFVEPPEP RAITDGLALL AELGALEDAR PGDRGVPRLT
PTGRDLARLP IDPRLGRMVL EAQRNGCLHD VLVVVAALSV QDPRERPLEK REQAAQLHAR
FRHEQSDFLT YLNLWSYLQH LQRDLSSSAF RRRVKAEMLH FLRIREWQDT YSQLRRVTRD
LRFSVEVREP AELGEDELFP APGYDADAVH RSLLAGLLGN IGLKDVREDT AKAGARTGGR
RESRPTGRQQ VEYTGARGAK FAVSPGSSLG RRSPDWVVAG ELVETSRLWA RVVAAIDPRW
IEPLAAHVVR RSYSEPRWSR KRAAVIATER VTLYGVPIVA GRSVPYGGVD PELARDLFIR
HALVEGDFET RHEFFHRNRE LLAEAEELEH RARRRDIVVD DEVLFAFYDA RVPADVVSGR
HFDAWWKDER RVRPDLLTFD PAMLVTEDDA VSEEQFPRVW RQGDLELALD YVFDPGSPAD
GLTVDVPVEV VNRFDDRDLL WQVPGFRHDL VTAMIRALPK ELRKNLAPAP DKAARFLERV
RPHVDRFWPA FEAEMPRLGD GTEIYAEDVD WTKVPAHLRP TFRVLAGDGS VLATGKDFPR
LRASLETAVV ETLAAAADDV QRTGATSWAD LPEEVPPTHT SVVRGSDVTS YPALVDEGTT
VGLRTFPDAA RAAVAHREGV LRLLVLALPS PARRVQDALT NDAKLLLARA PHADAGAVVA
DCAQAAAAQL LDEARGGEVR TAGEFRRLLE RVSPRYADLT ATAVERTLRV LRTAAAVEKN
ISRTSSLALV PSLADVREQF TGLVHAGFVA ETGVERLPDL LRYLQGIDRR LATMPENPQR
DRVRMAEFAR VREEHRKRLA RAGSPVPPEL ARIRWTLEEL RLQKFAPGIP TAHPVSDERV
LKALAEFP
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