| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_2839 |
|---|
| Symbol | |
|---|
| ID | 5336968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 4166097 |
|---|
| End bp | 4167512 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_001362571 |
|---|
| Protein GI | 152966787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.140147 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG CCGGGTCGGG TCCCCGGGCA GGGGCTGCTC TGCGTGGCCC GGTGCGGGCC
GCCGCTGCCG CTCTCACCGC GGTGCTGGTG ACCGCCGGCT GCACCGGGGG CGGTGGAGGC
GTACTGCCGT CCACCCCGAC CTCCACCGGC ACCGGCACCG GGGCCACCTC TGCCGAGACG
ACCTCGTCCG GGGCAGGGGA ACCGGCCGTC GTGCGGGCCG CCCCGCTCGA CGGCGGCGTC
CTGCAGCTCG GGCTGCACCC CCTGGTCCGC GTCGGCGGGC CGGCGGCGGT CGGTGACCTG
GTGGTGCTGA CCCTCGACCT CACGGTGGAG GAGGCACCGG ACGACGGGGA GATCTCCCTG
GGCGACCTGT TCCGCGACCC GGTGGGTGAC CGCACACCCA TGGGCGGCGT GCGGCTGCTG
GACCTGCGGG CGGACGTGGC GCACTCCGTC GCCCTCGACA CCGCGGGCGA CGGGGTGCTG
ACCGAGGGGT ACTCGGGCCT GGGGGGTGTC CGGCCGGGCG AGACGGTGCG CCTGCAGGCC
GCCTACGCGG CTCCTCCGGC GGGAACCCCG GACGTCGCGG TGCTGCTGCC CGGCACCGGG
CTCGTCGAGG CACTGGCGGT CGTCGACGGC GAGCTGCCGG GACCGACGCC CGACCTCACC
CCAGACGCCT CCACGGGCAC GGGTACGGGC ACGGCGGAGG ACGGTCCCGC ACCGCTCGAC
CCGGACGGGG CGGCGACGGC GGCGGTGCGT CCGCTGGAGG TCTACGCCGA GGACCTGCAG
GGCACCGTCC GCACCGAGAC CAGCGATGCG GGAGCGCGGG TGGCGCTCGC CGCGGACGTG
CTCTTCGCCC TCGACTCGGC CGAGCTGAGC CCCGAAGCCA GGGCGGTCCT GGAGACGGCC
GCCACCGACG TGCTCACCCG CCGGCCGGGT CCGGTGGCCG TGGTGGGGCA CACCGACGAC
CAGGGCGCCG ACGACTACAA CCTCGACCTG TCCCGGCGCC GGGCGCAGGC GGTCGCCGAC
GTGCTCGGAC CCCTGCTCGG GGCCGACTAC CCGCTCCAGG TGGACGGTCG CGGCGAGGCC
GAACCGGCGG TCCCGGGGCC CTCGACGGAG GCCCGCGCCC GCAACCGCCG TGTGGAGCTG
GTCGTCAGCA CGCCGTCGAC GGGGGCCGCG CTGGGGCGGC GCACCGGTGA GGTGCTGCCC
GCCCGGCGGC CATCGCGACC GGTCCGGAGG GGCTGGTCGT CGAGTCGCAG ACCGGCTGGC
CGTTCCGCGT GCGCACCGCG GCGGCTCGCC GGGTGCAGGG GAACGTCGTG GTGGACTTGG
AGATCACCGC GTTGCCGGCG ACGGCCGGCG CGGCGGGCCT GCCGCCGGCC CCGAACCTCT
TCAGCACCTT CCGCGACCCC CGCGACTTCG CGGTGA
|
|---|
| Protein sequence | MKRAGSGPRA GAALRGPVRA AAAALTAVLV TAGCTGGGGG VLPSTPTSTG TGTGATSAET
TSSGAGEPAV VRAAPLDGGV LQLGLHPLVR VGGPAAVGDL VVLTLDLTVE EAPDDGEISL
GDLFRDPVGD RTPMGGVRLL DLRADVAHSV ALDTAGDGVL TEGYSGLGGV RPGETVRLQA
AYAAPPAGTP DVAVLLPGTG LVEALAVVDG ELPGPTPDLT PDASTGTGTG TAEDGPAPLD
PDGAATAAVR PLEVYAEDLQ GTVRTETSDA GARVALAADV LFALDSAELS PEARAVLETA
ATDVLTRRPG PVAVVGHTDD QGADDYNLDL SRRRAQAVAD VLGPLLGADY PLQVDGRGEA
EPAVPGPSTE ARARNRRVEL VVSTPSTGAA LGRRTGEVLP ARRPSRPVRR GWSSSRRPAG
RSACAPRRLA GCRGTSWWTW RSPRCRRRPA RRACRRPRTS SAPSATPATS R
|
|---|
| |