| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_2625 |
|---|
| Symbol | |
|---|
| ID | 5334853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 4377777 |
|---|
| End bp | 4379030 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001362361 |
|---|
| Protein GI | 152966577 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC GACGCGTCCT GACCCTCTGC GCCGCTGTGA CCTTCCTGCT GACCGGCTGC
ACGAGCACGT CGAGCCCCGC CCCCTCCGAT GACCGCGCCG CCACGGCCGG CGCCTCCGCG
TCCGGATTCA GTTCCTCGAT CACCGTCACC GCTACCCCCG TGCAGCCGTT GCCGCCGCAG
GTGCGTACCG CGGTCGACGC CACGGTGGCG GCCGGCGCGG TCGGCGCGGT CCTGCACGTG
CGCGACGGGG ACCGGACCTG GGCCGGTAGC GCGGGCACCC TCGCCCCCAG TGCGAGCACG
GACGCGGGTG TGGACGCCGG TGGAGGAACA TCGGCGGTGG ACGCGCCCGC GCGGGTGGCG
AGCACCACGA AGTCGATGGT GGCCACCGTC GTGGTGCAAC TCGCCGAGGA AGGGGAGTTC
GGTCTCGACG ACCCGGTGGA CTCGGTGCTG CCTGGTGTCC TGCCCGCCGA ACGTGGCGTC
ACCGTGCGTC AGCTGCTGAA CCACACCAGC GGGCTGCCCT CGGCGCCGGT GTTCGACACC
TCTTCCGCTC AGCGCCTCCT CGACTCCGTG CGGCGCAGCT GGACCCCGCA GGAGCGGGTC
GCCGCCGCGC TGGCCCTGCC GTGGACGAAC GAGGCGGGGG CGGCGTTCTC CTACTCCAAC
GAGAACTACG CCGTCCTGGG GATGCTCATC GAGCACGTCA CCGGCGATGA CCTCGCGACG
GTGCTGCAGC AGCGGGTCTT CACCCCGGCT GGGATGCAGG ACACCAGCTA CCCCTCCGAC
ACCTCGATGC CCACCGACGC GCTGCGCGGC TACCAGTTCC CCGATACCGG CCCGGGACCG
GGTGGCTTGG ACACCACTGA GCAGGAGCCC TCGGCGTGGG ATGCGGGGGC GGCCGTCATC
TCCACCGCCC CGGACCTCAA CGCCTTCTTC CGCGCCCTCT TCAGCGGCGA ACTGGTCTCC
TCCGAGGGGG TGGCTCAGAT GCAGCAGATC GGTGTCGAGG GCTACGGCCT GGGCCTGCTC
GCCGGCGGGG ACCCCTGCGG GACGTTCCCA GTGCCGGCGG GGCAGACGCC GGAGCTGGTG
TTCGGTCAGC GCGGCAACGG GGTCGGCTAC CGCGCCCTGG CCCTGTCCTC TCCCGATGGG
CAGCGCCAGG CGGCGCTGGT GTGGACGGGG ACGGCGGCGG ATCCCGCGCG TGACCCGTTG
ACCGAACCCA CCAGTGCAGC AGTCACCGCG GGACTCGCCG CCACCTGCGG TTGA
|
|---|
| Protein sequence | MADRRVLTLC AAVTFLLTGC TSTSSPAPSD DRAATAGASA SGFSSSITVT ATPVQPLPPQ
VRTAVDATVA AGAVGAVLHV RDGDRTWAGS AGTLAPSAST DAGVDAGGGT SAVDAPARVA
STTKSMVATV VVQLAEEGEF GLDDPVDSVL PGVLPAERGV TVRQLLNHTS GLPSAPVFDT
SSAQRLLDSV RRSWTPQERV AAALALPWTN EAGAAFSYSN ENYAVLGMLI EHVTGDDLAT
VLQQRVFTPA GMQDTSYPSD TSMPTDALRG YQFPDTGPGP GGLDTTEQEP SAWDAGAAVI
STAPDLNAFF RALFSGELVS SEGVAQMQQI GVEGYGLGLL AGGDPCGTFP VPAGQTPELV
FGQRGNGVGY RALALSSPDG QRQAALVWTG TAADPARDPL TEPTSAAVTA GLAATCG
|
|---|
| |