| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_2548 |
|---|
| Symbol | |
|---|
| ID | 5337572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 4449835 |
|---|
| End bp | 4451232 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Endo-1,4-beta-xylanase |
|---|
| Protein accession | YP_001362287 |
|---|
| Protein GI | 152966503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC ACCGCAGTGT CGCGATGCTC GCGGCCGTCG GTCTTGGGCT GACGCTGTCA
GCAGGCCTCA CCCAGAACGC TACCGCCGCC CCCAGTGGGG CGCAGCCTGC GCACCCGCGC
AGCTCCGATG ACCCCAACTC GCTACGCGAA GTGGCTGAAA GCGCTGGAGT GCTGATCGGC
TCCGGCGCGA TCAAGAGCAT GACGACCACG TCCGACGGGC GGCCCTCGAA CTATCTGGCC
GAACCTCAGT TCCGGGAGGT GCTGGCCGAG GAGTTTAACA GTCTGTCCCC TGAGAACGAC
CTGGAGTGGA CCTTCGTCCA ACCTCAGGAG GGCGTCTACG ACTTCGAGGG CCTGGACCGG
CTGGTCGCCT TTGCCCAGGA GAACGACATG GAAGTCAAGG GCCACGGCCT TATCTCCGCC
TGCTGCAACC CGGATTACCT GGTCGCGAAG ATCGGCGACC CGGTCGCGTT CCGCGCTGCC
ATGGTGGAGC ACTTCACCAC GGTGATGCAG CGCTACGCCG GCAAAATGGA CCGGTGGGAC
GTCGTCAGCG AGGCGCTCAC GACCTACGGC GGAGAAGGGC TGCAGCACAC CGACTTCTAC
CAGGCATTGG GCCCGGAATA CGTCGCCGAG GCGTTCCGGA TCGCACACGC CGCAGACCCG
AACGCAAAGC TGTTCCTCAA CGAGAACCTG GTTGAAGCGT TCCCGCAGAA GCGGCAGGAG
CTCTACGAGC TCGTCTCCGG CCTCGTCGCT GACGGCGTCC CGATCCACGG TGTCGCCCTG
CAGATGCACC AAACCCTGCA AGGGCCGCAG CCGGGCGTGA TCACCGAGAT GGCCAACGCC
TACCACGCGC TGGGCCTTGA GGTCTCCATC GCCGAACTGG ATGTGCACAC CCTTGATTCC
GCAGCGCAGG CGCAGATCTA CCACGACGTG GTCGCCGAGG CACTGAACTC CGGGATCACC
GAGATCAGCT TCTGGGGCTT CACAGACAAG CACCTCTACA CCTGGCTGCC CGGAGCGAAG
CCACTCATCT TCGATGAGCA GTATCAGCCC AAGGCGGCCT ACTTCGCCGT CCTCGACGCG
TTGCAGGATT TCGAGGCACG ACCCGCTGTG GCCCTGCAGG GTGTGCAGGC CGACCTGGAC
CGCTACATCG CCGCCGGTGA GGCGCGCGGC CCGCTCGCGC AGCAGCTCAC CAACGTGCTG
CGTCAGGCCG AACGCCACGA GGCAGCCGAT CGGGACGCCG AGGCGGTGTC CGCCCTTCAG
CGAGCCCTCT CACGACTCGA GAACGTCAAG CGGACCGACC GAGTCAGCGC CACTGCCCAC
GACTCCCTCA CCCGGGGCAT CAACGAAGTC ACCGCCTTGC TCGCGCGACC GGAGGTGCAG
GCTCAGCCCG CGGCCTGA
|
|---|
| Protein sequence | MKKHRSVAML AAVGLGLTLS AGLTQNATAA PSGAQPAHPR SSDDPNSLRE VAESAGVLIG
SGAIKSMTTT SDGRPSNYLA EPQFREVLAE EFNSLSPEND LEWTFVQPQE GVYDFEGLDR
LVAFAQENDM EVKGHGLISA CCNPDYLVAK IGDPVAFRAA MVEHFTTVMQ RYAGKMDRWD
VVSEALTTYG GEGLQHTDFY QALGPEYVAE AFRIAHAADP NAKLFLNENL VEAFPQKRQE
LYELVSGLVA DGVPIHGVAL QMHQTLQGPQ PGVITEMANA YHALGLEVSI AELDVHTLDS
AAQAQIYHDV VAEALNSGIT EISFWGFTDK HLYTWLPGAK PLIFDEQYQP KAAYFAVLDA
LQDFEARPAV ALQGVQADLD RYIAAGEARG PLAQQLTNVL RQAERHEAAD RDAEAVSALQ
RALSRLENVK RTDRVSATAH DSLTRGINEV TALLARPEVQ AQPAA
|
|---|
| |