Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_2539 |
Symbol | |
ID | 5333930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 4458761 |
End bp | 4461043 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | glycoside hydrolase family 3 domain protein |
Protein accession | YP_001362278 |
Protein GI | 152966494 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGCAC CGTTCGGGGC CACCGTCGAT GTCCACCACC CCCCAGTCGA AGGGTGGGGT TGCGTCCTGG CCGGCTTCTC GACCCTGGGG CTACCATCGC GCGAGACGGC CATCAGGATC AACGAGCTGC AGCGCAAACA CCTGGAGCAG ACTCGCCTGG GCATTCCCGT GCTGGTGGCG GAGGAGGCGC TGCTGGGCCT GAAGGTCCGC GACGCGGTGA CCTTCCCCGA GGCCATCGCC CAAGCCGCCA CCTGGGATCC GCAGCTCATC GAGACGATGG GGCGCACCAT CGGGGGCCAG ATGAGTGCCC TCGGCGTGCG CCAAGCCCTC GCCCCGCTGG CCGACGTGGC TCGCGACCCA CGCTGGGGAC GCGTGGAGGA GACCTACGGC GAGGAGCCCT ACCTGGTCGG CGCCATGGCC ACCGCCTTCG TCCGCGGGGT CCAGGAAGCC GACCCAGTCC GGCCCTCGAT CGCCACCCTG AAGCACTTCG TCGGCTACAG CGCCAGCGCC GGCGGACGCA ACACCGACGC GGTGTCCCTG GGGCCGCGGG AGCTGCGGGA GGTGCACACC GTCGCTTTCG AGATGGCCAT CCGCGACGGC GGCGCCCGGG GAATCATGCC CTCCTACAAC AGCATCGACG GTGTTCCCGT CACCGGCTCC CGCGCCCTGC TCAGCGACCT GTTGCGCGAC GAACTCGGCT TCGACGGGCT CGTCATCTCC GACCTGGCCG CGGTCAGCCA ACTGCACACC AAGCACCTCA CGACCCCTGA CCTGGTGGCC GCTCAAGCCC GGGCCATCGG GGCCGGTGTC GACCTGGATC TGGACAACCA GGTGTCTACC TCCGCCCTGG TGCAGGCGGT GCAGCGCAGG CTGCTCACCG AGGCCGACCT GAACCGGGCG GTGGCTGCGG TCCTGCGGGC GAAGTTCGAG CTGGGCCTGT TCGAGAACCC CTACGTCGAC GTGGACGCCG TTCCGCAGAC CTTCGACTCC GATGCGGAGC GCGCACTGGC TCGGCGCATC GCCGAAGCCT CCATCGTGCT GCTGCAGAAC GATCCGGTCG CTTCCACGCC CGACGATGCG CCGGGGAATA CTCCGTTGCT GCCCCTGAAC CCCGCCATCG CCACCGTCGC GGTCATCGGT CCCAACGCCG ATCGCCTCAT GGGGCAGCTG GGCCACTACA GCTACCACGT CCTGGACAGC ACAGTCCGGC GTTTCGCCGC GGCCGCTGAC CCCAGCGCCA GGGCGGAGGA CGTGGCCGAC CTGGCCGGAC AGACCGGCGC CGATGCGGCC CACCGGATGG TGGAATCAGT TCCGGTGGTG ACGTTCCTGG AAGGTATTCG CCGTCGCCTG CCCCACGCGC AGGTGCTGCA CGAGCGTGGT TGCCCGGTCG CCGAGGCCGA CCGTTCCGGC TTCGCCGCCG CCGTGCAGGC GGCCACCCGC GCCGAGGTTA CCGTCCTCGT CGTCGGTGAC CAGGCGGGCA TCAACTCCTG GGGCACGGTG GGGGAAGGCC TGGACAGCGC CGACTGTGAC CTGCCCGGTG TGCAGCGCGA GCTCGTCGAG GCCGTGGTAG CGACCGGTAC TCCTACGGTC GTGGTCCTCA GCCACGGGCG GGCCTATGCC ATGGACTGGC TGCCCGCGAC GGTTCCGGCG ATCGTCACCA CCTTCTTCGG CGGTGAGGAG GCCGGTACCG CGTTGGCGTC GGTGCTGTTC GGGGATGTGA ACCCGGCCGG ACGCCTGCCC ATCGCGCTGC TGAACACCGC CGCAGCCGCA CCCCTGCCGT ACTGGCGCGC GCTGCAACAG CCGAGCTACG TCGATGGTGT CGCTGAGGCC GTCTTCGCCT TCGGCCACGG CCTCAGCTAC ACCCGCTTCG CGTACAGTGA CCTAGCCCTC GCCCAGGCCG CGGTGGGTAC CGAGGACGTG ATCAGGTTGT CGTTCACGGT GGCCAACGTG GGCGATCGTC CCGGCGATGA GGTGGTTCAG GTCTACGGCC GAGACGTCAC CGCCCGCACC GCCCGCCCCT ATCGCAAGCT GGTGGGCTTT CACCGCCTGC ACCTTCAAAC CGGTGAGAGC GCGCGGGTGA GCGCAGTCGT TCCCGCCAGC CTGTTCGCTC TGTGGGATCC CGAAGACGGC TGGATCGTCG AACCCGGTGC TGTGGAGCTC TTCGTCGGTG GCTCCTCGGC TGAGACGCCC CTGCGCGCGG GGGTGACACT GACCGGCGAC GTTCACCGCG CCGGCGCCAC CCGCGCTCTG AGCAGCACGG TGCGGGCGCA CTCCCTGCCC TGA
|
Protein sequence | MAAPFGATVD VHHPPVEGWG CVLAGFSTLG LPSRETAIRI NELQRKHLEQ TRLGIPVLVA EEALLGLKVR DAVTFPEAIA QAATWDPQLI ETMGRTIGGQ MSALGVRQAL APLADVARDP RWGRVEETYG EEPYLVGAMA TAFVRGVQEA DPVRPSIATL KHFVGYSASA GGRNTDAVSL GPRELREVHT VAFEMAIRDG GARGIMPSYN SIDGVPVTGS RALLSDLLRD ELGFDGLVIS DLAAVSQLHT KHLTTPDLVA AQARAIGAGV DLDLDNQVST SALVQAVQRR LLTEADLNRA VAAVLRAKFE LGLFENPYVD VDAVPQTFDS DAERALARRI AEASIVLLQN DPVASTPDDA PGNTPLLPLN PAIATVAVIG PNADRLMGQL GHYSYHVLDS TVRRFAAAAD PSARAEDVAD LAGQTGADAA HRMVESVPVV TFLEGIRRRL PHAQVLHERG CPVAEADRSG FAAAVQAATR AEVTVLVVGD QAGINSWGTV GEGLDSADCD LPGVQRELVE AVVATGTPTV VVLSHGRAYA MDWLPATVPA IVTTFFGGEE AGTALASVLF GDVNPAGRLP IALLNTAAAA PLPYWRALQQ PSYVDGVAEA VFAFGHGLSY TRFAYSDLAL AQAAVGTEDV IRLSFTVANV GDRPGDEVVQ VYGRDVTART ARPYRKLVGF HRLHLQTGES ARVSAVVPAS LFALWDPEDG WIVEPGAVEL FVGGSSAETP LRAGVTLTGD VHRAGATRAL SSTVRAHSLP
|
| |