Gene Krad_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_2010 
Symbol 
ID5335773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp213567 
End bp214931 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content76% 
IMG OID 
Productdiguanylate phosphodiesterase 
Protein accessionYP_001361759 
Protein GI152965975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCC GGCGGGCGAG GGAAGAGGAG CCCACCGTGC CCGCAGCGCC TCTGCACCCT 
CGCGAGGGCG AGCGGCTGGC GTCGTTGCGC AGCTACCGGG TGCTGGACAC CGGTGCCGAC
GCGGCCCTCG ACGCCCTGGC GGCGGCGACG GCGCGGCTGC TGGACGCTCC CACCGCCACG
ATCTCCCTGG TGGACGAGGA CCGGCAGTGG TTCGCCTCCA CCCGCGACCT GAGCGCGGTC
CTGGGCTACG AGACCCCGCA GACGTCGCGG GACGTGTCCT TCTGCGCCTG GACGGTGGCG
CAGGAGCGGA CGCTGGTGGT GCCCGACGCC CGCACCGACG CGCGGTTCGC CGACAACGCC
ATGGTCACCG GCCCGGAGCA GGTCCGCGCC TACGCCGGCG CCCCGATCAT CGGCCGCGAC
GGGCTGCCGC TGGGGGCGCT GTGCGTCATG GACCGCGAGG CGCGCGACTT CGCCGAGGCG
GACGTGCAGG CCCTCAGCGC GCTGGCGACC AGCGTGGCGG AGCTGCTGGA GCTGCGCCGG
CTCGACGCCG CGGCCGGGCT GGGGTCCCGC CACGTGCTGG ACGAGAGCCA CGCCCTGCGC
GCCGGCATCG ACGCGCAGGA GCTGGTGGTG CACTACCAGC CGGTGGTGGA CCTGCCCACC
GGGCGCTGGG AGGGCGTGGA GGCGCTGGTG CGCTGGGAGC ACCCCCAGCG GGGTCTGCTG
GCCCCGGCGG CGTTCCTGCC GGTGGCCGAG GCCAGCGGTC TGATCGTCCC GCTGGGACGG
CAGGTGCTGA CGCTGGCGTG CACGCAGGTG GCGCTGTGGC GCGACACCCC GCCCACGGGC
GGCGGCGCCG GTGGCGGGGC GCGCGACCTG CACGTGGCGG TCAACCTCTC CGGACGCCAG
CTCGGCGAGC CGGACGTGGT CGACGTGATC ACCGACGCGC TGCTCGTCAG CGGTCTGCCC
GCGCAGGCGC TGACGCTGGA GCTGACCGAG ACGTCCCTGG CCGGCACCGG CGCGCAGGTG
GACGCCGCGC TGGCGGCGAT CCGGGCGAGG GGGGTGCGGC TGGCCCTGGA CGACTTCGGC
ACCGGTTACG CCAGCTACGC CTACCTGCAG CGCTTCCAGC CCGACGTGGT AAAGATCGAC
CGCTGCTTCG TGGCCGCGCT GGGGCGCTCG GAGCGCGACG ACCTGCTGAC GTCCTCCCTG
ATCGGCCTGG GGCTGCAGCT GGGGTGCGGG GTCGTCGCCG AGGGGGTGGA GACGCCCGAG
CAGGCCCGGA TGCTCGCCGA CCTGGGCGTC ACGACCGCGC AGGGCTACCT GTTCTCCCCG
CCCCGCACCG CGCAGGCCCT GGGCGCGCGG CTGGTGGCTC CGTGA
 
Protein sequence
MAGRRAREEE PTVPAAPLHP REGERLASLR SYRVLDTGAD AALDALAAAT ARLLDAPTAT 
ISLVDEDRQW FASTRDLSAV LGYETPQTSR DVSFCAWTVA QERTLVVPDA RTDARFADNA
MVTGPEQVRA YAGAPIIGRD GLPLGALCVM DREARDFAEA DVQALSALAT SVAELLELRR
LDAAAGLGSR HVLDESHALR AGIDAQELVV HYQPVVDLPT GRWEGVEALV RWEHPQRGLL
APAAFLPVAE ASGLIVPLGR QVLTLACTQV ALWRDTPPTG GGAGGGARDL HVAVNLSGRQ
LGEPDVVDVI TDALLVSGLP AQALTLELTE TSLAGTGAQV DAALAAIRAR GVRLALDDFG
TGYASYAYLQ RFQPDVVKID RCFVAALGRS ERDDLLTSSL IGLGLQLGCG VVAEGVETPE
QARMLADLGV TTAQGYLFSP PRTAQALGAR LVAP