Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_2009 |
Symbol | |
ID | 5335772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 215208 |
End bp | 218006 |
Gene Length | 2799 bp |
Protein Length | 932 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001361758 |
Protein GI | 152965974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.240269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAGCG GAGGAGACCA CGTCCCCGGC CGGTCGCCCG GACCCCTGGC GGGCGGGCGA CCCGACGGCG ACGCCGCCGC GTCCTCCCCG GCGACCGCGG TGGAGGCCGC CGCCCGGGCG CTGCGCGCCG ACCCCGCCCG GCTCGCCGCC GCCCGCCGGC TGAGCCCCGG CGGGACCACC CTGCCCGGCC TGGACCAGCT GGCCCACCTC GCCACCCAGC TCCTCGGTGC CCCCTCGGCG CAGATCTCCC TGCTCACCGA CGTCGAGGCG ATCGCCGGTG GGGTCGGGCC CCAGGCGGGG CGGGCCGGTG AGCAGGGGCC GCTCGGCCAG GCGCTGTGCT CGCTGACCGC CGCGTCGGGT GCTCCCCTGG CCATCGCCGA CACCCGCGCC GACCCCCGCG TCGCCGACCT GGACCCGGTC TCCTCCGGGG TGGTGGGGTC CTACCTGGGC ATACCGCTCG CCGCCGGCGG GGGTGACGTG GTGGGTGCGG TGTGCGTGGG TGGCCCCGAC CCCCGCGCGT GGAGCGAGCA GGACGTCGCC CTGCTGGAGC AGATCGGCGC CGCCGCCGCG GCCGAGCTGG AACTGGCCGC CCTCTCCGGC GAGCACGTCG CCGACCGGGC GCTGCTGCAG CTGACGGTCG ACGCCGCGCA GCTGGGCACC TTCGACCTGG ACCTCGTCAC CGGGCGGCTG AGCATGAACG AGCGGCTGCT GCAGCTGTCC GGGCTGACTC CGGAGACGTT CGACGGCACC CCTGAGGACG TGTACTCCCG CATCCACCCC GACGACCGCG AGGCCGCCGT CGCCGCGGTG AGGGCGGTCA CCGCCGCCGG CGGGGTCTAC GCCGCGGAGT ACCGCATCCT CGACCCCGAC GGCAGCACCC GCTGGCTCGC CGCCCGGGGC AGCACCCTGC CGGCCGGCGG CCCCGGGCCC GACGGGGCAC CGGTGCGGCT GCTGGGCGTC GTCCACGACA TCACCGCCGT GCGCGAGGGC GCGCAGCGCG TGGAGGAGAT CCTGGACTCC ATGGCCGTGG CCTACCTGGC CGTGGACGCG GGGTGGACGA TCACCTACGC CAACGTCGAG GGCGAGCGGA TCGCCGCCAC CCCCCGCGAG GAGCTCATCG GCCGCAGCTT CTGGGAGGCC TTCCCCGCCA CCGTCGGCAC CGTCTTCGAG GACGGCTACC GCCGCGCCGT GACCACCGGC GAGACGGTGA CCTTCGACGC CTTCTACCCC GCCCCCCTGG ACGTGTGGGT GGAGGTGCGC GCCGTGCCGG GGAACGGCGG GCTGGGCCTG TACTTCCTCG ACATCACCGC CCGCAAGACC GCCCAGCGGT CCGCCGAGGA CGCGCGCCGG ACCGCCGAGG CCGCCAACAC CCGCCTGGCG CTGCTGGCCG CGACCTCGCG GCAGATGTCG GAGACCCTCG AGGCCGAGCA GGCCGTGGCG CGCCTGGCCG AGCTGGTGGT CCCCGCCCTG GGCGACTGGT GCGTCATCAG CCTCCTCGAC GACGACACCC CGGCCCGGAC CTCGGCCTCC GCGCGCGCCG GCACCGCGGC CGGGCGCCCC GAGCGGCTGC GGCGGGGGCT GCACGACGCC GGGTCCTGGC ACCACGACGA GAGGCTGCGC CCCCTGGTGG AGGAGTACGC CGCGCACCGC CTGGAGGAGC TGACCGACGC CGCCTTCGTG TGGCGGTCGC TGCGCCAGGC CCGCCCGGTC CTCGTCCCCG ACGCCACCCG CGCCATCGGC GCCGTGCTGC GCCCGGACGG GCGGGTGCGC CCCCTGCTGG CCGAGCTCGC CCCCAGCTCC GCGGCGATCC TGCCGCTGCG CGGGCGCGGG CGCACCGTCG GGCTGATGAC CCTCTTCGCC GGACCGGACC GCGCGCCCCT GGACGCCGAG GGGCTGACGG TGGCCGCCGA GGTCGCCGAC CGCGCCGGCC TGGCCCTGGA CTCCGCCCGC CTCTACCGCC AGCAGCGCGA CCTGGCCGCC GCCTTCCAGC GCTCCCTGCT GAGCGAGCCG CCGGAGCCGG ACCACGGGCA GATCGTCGTG CGCTACAGCC CCGCGGCCGA GGCCGCGCAG GTCGGGGGCG ACTGGTACGA CGCGTTCATG CAGCCGGGCG GGGCCACGGT GCTGGTCATC GGCGACGTCG TCGGCCACGA CACCGAGGCC GCCGCGGCCA TGAGCCAGGT CCGCACCATC GTGCGTTCCA TGGGCGCCCT CGGCGACGAG TCCCCGGCGC GCGTCCTGGC CAAGACCGAC CAGGCCATGG CCAACCTCAT GATCTCCACC ACCGCCACCG CCATCGCCGC CCGCCTGGAG CAGAGCCTCG ACGAGCGCGA GCGCGGGGTG ACCCGGTTGC GCTGGTCCAA CGCCGGGCAC CCGCCGGCGA TGGTCGTCCA CCCCGACGGC AGCGTCCTGC CGCTGGTGAA CCTGCACCCG GACCTGCTGC TGGGGGTGGT GCCCGGCACC GACCGCCGCG ACACCGAGGT CGTCCTCGAC CGCGGGTCCA CCGTCCTCCT CTACACCGAC GGCCTCGTGG AGCGCCGGGA CCAGCCGCTG CAGGAGGGCC TGGAGGAGCT GCAGGCGGTG CTGGAGGACC TCGCCGCGCA GGACCACGAC CTGGACACCC TCGTGGACCG CGTGCTGGCC CGGATGCTGC CGCCCACCCC GGAGGACGAC GTGGCCGTCG TCGCGGTGCG CCTGCACCGC CAGGACCGGC CCCGCCCCGC CGAAGCCGGC CCGCAGAGGG TCCCGCCGCA CGTGCCGCCG GAACCGGACG TCACGGGGCG GCGGCCCCGC CGGCGCTGA
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Protein sequence | MPSGGDHVPG RSPGPLAGGR PDGDAAASSP ATAVEAAARA LRADPARLAA ARRLSPGGTT LPGLDQLAHL ATQLLGAPSA QISLLTDVEA IAGGVGPQAG RAGEQGPLGQ ALCSLTAASG APLAIADTRA DPRVADLDPV SSGVVGSYLG IPLAAGGGDV VGAVCVGGPD PRAWSEQDVA LLEQIGAAAA AELELAALSG EHVADRALLQ LTVDAAQLGT FDLDLVTGRL SMNERLLQLS GLTPETFDGT PEDVYSRIHP DDREAAVAAV RAVTAAGGVY AAEYRILDPD GSTRWLAARG STLPAGGPGP DGAPVRLLGV VHDITAVREG AQRVEEILDS MAVAYLAVDA GWTITYANVE GERIAATPRE ELIGRSFWEA FPATVGTVFE DGYRRAVTTG ETVTFDAFYP APLDVWVEVR AVPGNGGLGL YFLDITARKT AQRSAEDARR TAEAANTRLA LLAATSRQMS ETLEAEQAVA RLAELVVPAL GDWCVISLLD DDTPARTSAS ARAGTAAGRP ERLRRGLHDA GSWHHDERLR PLVEEYAAHR LEELTDAAFV WRSLRQARPV LVPDATRAIG AVLRPDGRVR PLLAELAPSS AAILPLRGRG RTVGLMTLFA GPDRAPLDAE GLTVAAEVAD RAGLALDSAR LYRQQRDLAA AFQRSLLSEP PEPDHGQIVV RYSPAAEAAQ VGGDWYDAFM QPGGATVLVI GDVVGHDTEA AAAMSQVRTI VRSMGALGDE SPARVLAKTD QAMANLMIST TATAIAARLE QSLDERERGV TRLRWSNAGH PPAMVVHPDG SVLPLVNLHP DLLLGVVPGT DRRDTEVVLD RGSTVLLYTD GLVERRDQPL QEGLEELQAV LEDLAAQDHD LDTLVDRVLA RMLPPTPEDD VAVVAVRLHR QDRPRPAEAG PQRVPPHVPP EPDVTGRRPR RR
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