Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1820 |
Symbol | |
ID | 5337153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 411161 |
End bp | 411838 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_001361570 |
Protein GI | 152965786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000660961 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.111651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACTGA TCGACCACCT GCGCCTCGCC GCGCGCCGCT GGACCTGGAT CCTCGCCGGG ATCCTCCTCG GGGGCCTCGC CGCCGGCGGC TGGGCCTACC TCACGCCCCG CACCTACGCC TCCAGCACCG AGCTCTTCGT CGGCAGCGTC CTCAACGGCC AGAACGAGAC CGGGGGAGGG GCCAACTCGG CCTCCCAGTT CGTCCTGAGC CGGATGAGCA CCTACGCCCA GCTCGTCGAC TCGCCCGACA TCGCCGCCAG CGTCGAGGAC CGCACCGGCC TGGGGCTGAC GTCGGCGCAG TTCGCCGACT CCGTCTCCGC CACCGTCCCC CCCGGCACGG TCCTGCTGCG CGTCACCGCC CAGGCCCGCA CCCCCGAGCG CGCCCAGGAC CTCGCCGGGG CCACCGCCGA CGCGCTGGCC ACCACCATCG AGGCCCTGGA GCAGAACACC TCCGGGGGCG GGAAGATCGT CGACGCCACC GTCACCAGCC CCGCCACCGC CCCCAACCGC CCAGCCTCCC CGGACGTCCC CACCGGTCTC GGCATCGGGC TGGCCGCCGG GCTCGCCCTC GGCGTCCTCG CCGCCACCGC CCGCGACCAG GCCGTGCGCC GGCGCAGCCT GGCCCTCGCC GAGCGCGACA GCCTCGACGA CCCCGCCCAC CTGCTGGCCC GCCGGTGA
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Protein sequence | MELIDHLRLA ARRWTWILAG ILLGGLAAGG WAYLTPRTYA SSTELFVGSV LNGQNETGGG ANSASQFVLS RMSTYAQLVD SPDIAASVED RTGLGLTSAQ FADSVSATVP PGTVLLRVTA QARTPERAQD LAGATADALA TTIEALEQNT SGGGKIVDAT VTSPATAPNR PASPDVPTGL GIGLAAGLAL GVLAATARDQ AVRRRSLALA ERDSLDDPAH LLARR
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