Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1782 |
Symbol | |
ID | 5334696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 454079 |
End bp | 455725 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_001361532 |
Protein GI | 152965748 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.638114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCGGGG GCGCGGGGTG GCTCAATGAC CCCGTGACGG CAACCCCCGC GACGCACGGC CCGCACCGGC GGCCTCCCCC CTCGACGCGC GCGGTCGCCC TCTCCGAGCT GCGCGGCGTG CTCGGGCTGC CCCCCGGGGC CGGTCCCGCC GACCCGTCCG GAGCCGATCC CGCGGTGCGC GGGGTGACCC TGGACTCCCG GCACGTCCTG CCGGGCGACC TCTACGCCGC CCTGCCCGGT GCGCGGCACC ACGGCGCGCA GTTCGCCGGG CAGGCCCGGG CGAGCGGTGC GGCGGCCGCG CTCAGCGACC GCCCCCTGCC GGGGTTGCCC ACCCTGGTCG TCCCCGACCC GCGGGCGGTC CTGGGCCCCC TCGCCGCCCA CCTGCACGAC CACCCCAGCC ACCACCTGGA GGTGTACGGC GTCACCGGCA CCAACGGCAA GACGAGCACC ACCCACCTGC TGGACGCCGG GTTGCGCTCC GCGGGCCACC GGACGGGCAT GATCAGCGGG ATCCGGGTCC GCACCCCGGA GTGGTCGCGG CCGGCCCAGC GCACCACGCC CGAGGCGCCG GAGCTGCAGG AGACGCTGGC CGCCCTGCGC GAGCAGGGGG CCACCAGCGC CGCGGTGGAG GTCTCCAGCC ACGGCCTCGC CCTGCACCGG GTCGACGGCA CCCGCTTCCG CGCGGCGGTG TTCACCAACC TCGGCCGCGA CCACCTGGAC CTGCACGGGG ACCAGGAGTC CTACTTCGCG GCCAAGGCCT CCCTGTTCGC ACCCCACCGC TGCGCCCTGG CGGTGGTCAA CGTCGACGAC GCCCACGGCC GGCGGCTGGC CGCGCAGGTG CGCGTCCCCG TCACGACGTT CTCGGCGGCG GGCCGGCGCG AGGCCGACTG GCGCGCCACC GAGGTCCGCG CCGACGCCGA CCGCACCTCC TTCCGGCTGC TGGGCCCGGG CACGGACCGG CGGGTGCGGC TGCACCTGCT GGGGACCCAC CAGGTCGACA ACGCCCTGGG GGCCGTCGCC GCCCTGCACG CCGGCGGCCT CAACGTGGAG GACGTCCTGC GCGGGATGGA GGACCTGACC GCGGTCAGCG GGCGGCTGCA GCGGATCGAC GAGGGCCAGC CGTTCCTGGC GCTGGTCGAC TACGCGCACA ACGTCGCCGC CCAGCGGCGC CTGCTCCCCT TCCTGCGGAC CCTGACCGGC GGGCGCCTGG TGGTCGTCCT GGGCGCCACC GGCGAACGGG ACCCCGGCAA GCGCGGGCCG CTGGGGCGCA CCGCGGCCCA GCTGGGCGAC GTGGTCATCG TCACCGACGA GAGCCCCCAC GACGACGACC CCGCCGCGCT GCGCGAGGCC GTGGCCGGCG GCGCCCGGGG CGCCGCCTCG GCCCAGGTGC ACGTGGAGGC CGACCGCGAC CGGGCGATCC GGCTGGCCGT GTCCCTGGCC GACCCCGGCG ACGTCGTCGT CGTCAGCGGC CGCGGTCACG ACGGGCAGCT CGTGGCCGGG GGACGGACCC GCGCCTTCGA CGACGGCGCG CGGCTGCGGG CGGCGCTGGC GCAGCTGGCC CGCGGAGGCC GGGCGCCGAC GGTGCTGCTG CCGGAGGATC AGGTGCGGAA GTCGATGGTG GCCCGGCCGC CGTGCTCGTC GAGGTAG
|
Protein sequence | MVGGAGWLND PVTATPATHG PHRRPPPSTR AVALSELRGV LGLPPGAGPA DPSGADPAVR GVTLDSRHVL PGDLYAALPG ARHHGAQFAG QARASGAAAA LSDRPLPGLP TLVVPDPRAV LGPLAAHLHD HPSHHLEVYG VTGTNGKTST THLLDAGLRS AGHRTGMISG IRVRTPEWSR PAQRTTPEAP ELQETLAALR EQGATSAAVE VSSHGLALHR VDGTRFRAAV FTNLGRDHLD LHGDQESYFA AKASLFAPHR CALAVVNVDD AHGRRLAAQV RVPVTTFSAA GRREADWRAT EVRADADRTS FRLLGPGTDR RVRLHLLGTH QVDNALGAVA ALHAGGLNVE DVLRGMEDLT AVSGRLQRID EGQPFLALVD YAHNVAAQRR LLPFLRTLTG GRLVVVLGAT GERDPGKRGP LGRTAAQLGD VVIVTDESPH DDDPAALREA VAGGARGAAS AQVHVEADRD RAIRLAVSLA DPGDVVVVSG RGHDGQLVAG GRTRAFDDGA RLRAALAQLA RGGRAPTVLL PEDQVRKSMV ARPPCSSR
|
| |