| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1640 |
|---|
| Symbol | |
|---|
| ID | 5334701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 562789 |
|---|
| End bp | 566151 |
|---|
| Gene Length | 3363 bp |
|---|
| Protein Length | 1120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 81% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD |
|---|
| Protein accession | YP_001361390 |
|---|
| Protein GI | 152965606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.385826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0736932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG CCACCCGCCC CCGGGGACCC CTCGACCCCC GCCTGCTGCG CCACGCCCGC
CCGGCCCGGG CGGGGATCGC CGCGATCGGG GCCGTCGAGG TCGTCGCCGC GGGGCTGCTC
CTCACCCAGG CGTTCGCCCT CACCGACCTC GTCGTCGCCC TCTGGCGCGG CACGGCGGCC
TCGGGGGCCC TGGCCCTGCT CGCCGGGGCC GTCGGCGGGC GGGTCCTGAC CTCCTGGGCC
GCGGCGCGGC TGTCCCAGCG CACCGCGACG GCCGTGCGCC GGGACCTGCA CGAGCAGGTC
CTGGCCCGCG TCCTGCGGCT GGGACCGGCC TGGGTGGAGC GGTTCGGGCG CGCCCGGGCC
TCCGCCGTCC TCACCCAGGG CCTGCCCGCC CTCGACGGCT GGTTCACCCG CTACCTGCCC
GCCCTCGTCC CCGGGGCGCT GCTGCCTCCG GTGGTCCTGC TGCTGCTGGC CCGCCTGGAC
CTGCGCTCCG CGCTCACCGT CGCCCTGACC CTGCCGCTGG TCCCGGTCTT CGCCGTCCTG
CTCGGCCGCG CCGCCCAGGC CCGCGCGGAC CGGCAGTGGC ACGTCCAGCG CACCCTGTCC
GCGCACTTCC TCGACACCGT GCGCGGGCTG CCGACGCTGC GCGCGCACCG CCGGGCCCAG
CGCCAGGTCG CGGCCGTCGC GGCCGTCACC GACGCCTCCC GCCGGGCAAC GATGTCGGTG
CTGCGCGTGG CGTTCCTGTC CTCCACCGCC CTGGACCTGG TGGGCACGCT GTCCACCGGC
CTGGTCGCGG TCACCGCCGG CATGCGCCTG GCCGGGGGGA CCCTCGACCT GCGCACCGCC
CTGCTGGTCA TCCTCCTCAC CCCCGAGGCC TACCGGCCGC TGCGGGAGGT CGGGGCCCGC
TTCCACGACT CCGCCGACGC CACCGCGGTG ATCGACGACG TCGACGAGGT CCTCACCGCC
CCGGTGCCCC CCGTCGCCGC CGGCACCGCC GCGGGGGTGC GGCTGCGGGG GGTGCGGGTG
CGCCGCGACC ACGGGGGCGA CGGGGGCGGC GCGGGGGGCG ACGTGCTGGA CGGGGTCGAC
CTCGACGTCG CCCCCGGGGA GCTGCACGCC CTCGCGGGGG AGTCCGGGGC GGGCAAGACC
ACCCTGGCCC GCGTCGCGGC CGGGGTCCTC GTCCCCGACG GCGGGAGCGT CGAGCACACC
CTCGACGGTC TCCTCCACCT GCCCCAGCGG CCGTCCTTCC CCCACGCCGG GACGGTCGCG
CAGGCCGTCC GCGCCGGGCG CACGGCCACC GACGAGGAGG TCCGCGCGGC CCTCGACCTC
GCCGCCGCCC CCGACCTCGC CCTGGACACC GCCCTGGGCG AGGACGCGGC GGGGCTCTCC
GCCGGCCAGC GCCAGCGGGT GGCGCTGGCC CGCACGTTCC TCACCGCGCG CACCGGGACC
GGGACCCTCG TGCTGGACGA GCCGACCGCC CACCTGGACC CCGCCGCCGA GGCCGTCGTC
GTCGCCGCGC TGCGCGCCCT GGCCCACGAG CGGGGCTGGG CCGTCCTCGT CGTGGCCCAC
CGCCCGGCCC TGCTGGCCGC CGCCGACCGC ACCACCACCC TCACTCGTCC CGCCGCTCCC
CCCGCCTCCC CCGCCATGGC ACCCTCGCCC GCGCCCGCCC GCCCCGGGTC CGGTGCCGCC
CGCCCCGGCG CGGTCGCGGA CCTCGCGGGG GCGTCGCGCG GACCCCGGCG CGGGGCGGGC
GCGCTGGCCG TCCTCGCTGG GGTCGCCGCG GTGCTGGCCG CCGCCACCCT GACCGCCGCC
GCGACCTGGC TGATCGTGCG CGCCGCCGAC CGCCCCCCGG TGCTGACCCT GTCGGTGGCC
GCCGTGGTCG TGCGCGCCTC CGCCACCGCC CGGCCCCTGC TCGTCTACGC CGAGCGCCTG
CTCAGCCACG ACACCGCCTT CGCCCGCCTG GCCCGCTGGC GCTCCGACGT CGTGGCCGCC
CTGATCCCGC GCCTGCCGGG CCCGCTCTCG CGCCGGCGCT CCGGGCGCTC GGGGGAGCTG
CTCGTGCAGC TCGTCGAGGA CGTCGACGCC CGCGTGGACG GGCTGCTGCG CTTCCGCCAC
CCCGTCACCG TCACCGTCAC CGCGCTGGTC CTGGCCCTGG CCGCGGCGGC CGCCGTGGAC
GTCCGCTCCG CCCTCGCCGC GCTGCCCGCC GTGGCCGTCG TCGTCCTCGC CGCCCCGGCC
CTGGCCGCCC GCGCCGAGCG CCGCGACCGC GCCCACCGCA CCGAGGTCGG CGCCCTCGCC
GCGGCGACGG TGGAGACCCT CGACGCCGTC GAGGACCTGC GCACCCTGGG CAGCGCCGAC
CCGCTGGCGA CGGTACGCCG CCGGGTCTCC GCCCTGGCCC GGGCGGAGAC CCGGCGGGCG
CGGGCGGCGG CGGCGACCGC CGCCCTCACC GCCCTGGGCA CCGGGGGCGC GGTGCTCGCC
CTGGCCCTCG TCGCCGGGCT CACCGCCCCC GCCGGTGGGC CAGGGGTGGC CTGGGTCGCC
GCGGTCGTCC TGGCCGGGCT CACCGTCGCC GACGCCGCCC GCGGCCTGCC CGACGCCGCG
CGCGCCCGCG AACGCGCCCG CGAGGCCCGC CGCCGCAGCG AGGCGCTGCT GGCCACTCCC
CCGGCGGCCG TGGAGCCCTC CGCCCCGCGC GCCCCCGGCC CGCCCCGCGA CCTCGTGCTC
AGCGTGCGCG GCCTGCGCGC CGGCTGGGGG GAGGACTGCC TGCGCGGGCT GGACCTGGAC
CTGCGCCGCG GGGAGGTCGT GGCCGTGCGC GGGGCGTCGG GTTCGGGGAA GTCGACGCTG
GCAGCGGTGC TGCAGCGCTT CCTGGACCCC CGCGCCGGGC GGGTCCTGCT CGACGGGGTG
GAGGTGACCG GGCTGGCCGG GGACGACGTC CGCGCGGTCG TGGGCCGGGT CGCCGACGAC
GAGCACGTGT TCGCCACGAC GCTGCGGGAG AACCTGCTGC TGGCCGCACC CGGTGCCGGG
GACGAGGCGC TGACCGCGGC GCTGCACCGG GTCCGCCTGG ACGACTGGTC CGCGGCGCTG
CCGCGGGGGC TGGACACCCG CCTGGGCGAC GGCGGGGAGC CGATGTCCGG CGGGGAGCGC
CGCCGGCTGG CGATGGCGCG CGCCCTGCTC GCCGACGTGC GGGTCCTCGT GCTGGACGAG
CCGTCCGAGG GCCTGGACGA GGAGACCGGG ACCCGGTTGC TGGGCGACCT GCTGGACGCC
CGCGGGGAGC AGGCGGTGCT GCTGCTGGCC CACCGCGCCG AGGGCGTCGA CCGCGCCGAC
CGCGTCCTGG ACCTCGTCGA CGGAGCGTTG ACCGGAGTTC CCACCCTCAC CCGGTCGGTC
TAG
|
|---|
| Protein sequence | MSAATRPRGP LDPRLLRHAR PARAGIAAIG AVEVVAAGLL LTQAFALTDL VVALWRGTAA
SGALALLAGA VGGRVLTSWA AARLSQRTAT AVRRDLHEQV LARVLRLGPA WVERFGRARA
SAVLTQGLPA LDGWFTRYLP ALVPGALLPP VVLLLLARLD LRSALTVALT LPLVPVFAVL
LGRAAQARAD RQWHVQRTLS AHFLDTVRGL PTLRAHRRAQ RQVAAVAAVT DASRRATMSV
LRVAFLSSTA LDLVGTLSTG LVAVTAGMRL AGGTLDLRTA LLVILLTPEA YRPLREVGAR
FHDSADATAV IDDVDEVLTA PVPPVAAGTA AGVRLRGVRV RRDHGGDGGG AGGDVLDGVD
LDVAPGELHA LAGESGAGKT TLARVAAGVL VPDGGSVEHT LDGLLHLPQR PSFPHAGTVA
QAVRAGRTAT DEEVRAALDL AAAPDLALDT ALGEDAAGLS AGQRQRVALA RTFLTARTGT
GTLVLDEPTA HLDPAAEAVV VAALRALAHE RGWAVLVVAH RPALLAAADR TTTLTRPAAP
PASPAMAPSP APARPGSGAA RPGAVADLAG ASRGPRRGAG ALAVLAGVAA VLAAATLTAA
ATWLIVRAAD RPPVLTLSVA AVVVRASATA RPLLVYAERL LSHDTAFARL ARWRSDVVAA
LIPRLPGPLS RRRSGRSGEL LVQLVEDVDA RVDGLLRFRH PVTVTVTALV LALAAAAAVD
VRSALAALPA VAVVVLAAPA LAARAERRDR AHRTEVGALA AATVETLDAV EDLRTLGSAD
PLATVRRRVS ALARAETRRA RAAAATAALT ALGTGGAVLA LALVAGLTAP AGGPGVAWVA
AVVLAGLTVA DAARGLPDAA RARERAREAR RRSEALLATP PAAVEPSAPR APGPPRDLVL
SVRGLRAGWG EDCLRGLDLD LRRGEVVAVR GASGSGKSTL AAVLQRFLDP RAGRVLLDGV
EVTGLAGDDV RAVVGRVADD EHVFATTLRE NLLLAAPGAG DEALTAALHR VRLDDWSAAL
PRGLDTRLGD GGEPMSGGER RRLAMARALL ADVRVLVLDE PSEGLDEETG TRLLGDLLDA
RGEQAVLLLA HRAEGVDRAD RVLDLVDGAL TGVPTLTRSV
|
|---|
| |