Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1561 |
Symbol | |
ID | 5336000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 648608 |
End bp | 649267 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | TrkA-N domain protein |
Protein accession | YP_001361311 |
Protein GI | 152965527 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.534326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.490374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGTGG TCATCGCCGG CGCCGGCATC GTCGGCCGGT CCATCGCCCG CGAGCTGCTC GGGAACGGCC ACCGCGTGCT GCTCATCGAC CGCAGCCCCG CCGCCATGAA GATCACCAGC GTGCCCGACG CCCAGTGGCT GCTGGCCGAC GCCTGCGAGA TCGTCAGCCT CGACGAGGCC GAGCTCGCCG ACTGCGACGT CGTGGTGGCC GCGACCGGCG ACGACAAGGC GAACCTCGTC GTGTCGCTGC TGGCCAAGAC CGAGTACGGC GTCCCGCGCA CGGTGGCGCG GGTGAACAAC CCCAAGAACG AGTGGCTCTT CGACGAGGCG TGGGGCGTCG ACGTGGCCGT GTCGACCCCG CGGCTCATGA CGGCCCTGGT CGAGGAGGCC GTGAGCGTCG GCGAGCTCGT CCGCCTGTTC ACCTTCCAGC AGGGGCGTTC CTCGCTGGCG GAGTACACCC TGCAGGGCGG GAGCTCGGTG ATGGGGCGGA CCGTCGGTGA GGTCACCTGG CCGGAGGACA CCGTGCTGGT CGCGATCGTG CGGGCCGACC GCCCCCTGTC TCCCAGTCCC GACGACGTCC TGGAGGACGG GGACCACCTG CTGTTCCTCT CGGTGCCCGA CGCCGAGGCG GCCCTGCGGA CGATGCTGGG CACCCCGTGA
|
Protein sequence | MRVVIAGAGI VGRSIARELL GNGHRVLLID RSPAAMKITS VPDAQWLLAD ACEIVSLDEA ELADCDVVVA ATGDDKANLV VSLLAKTEYG VPRTVARVNN PKNEWLFDEA WGVDVAVSTP RLMTALVEEA VSVGELVRLF TFQQGRSSLA EYTLQGGSSV MGRTVGEVTW PEDTVLVAIV RADRPLSPSP DDVLEDGDHL LFLSVPDAEA ALRTMLGTP
|
| |