| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1443 |
|---|
| Symbol | |
|---|
| ID | 5336804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 774654 |
|---|
| End bp | 777788 |
|---|
| Gene Length | 3135 bp |
|---|
| Protein Length | 1044 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_001361195 |
|---|
| Protein GI | 152965411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.366242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAGG TCCGGGTCTA CGAGCTCGCC AAGGAGTTCG GAGTCGAGAG CAAGGTCGTC
CTGGCCACGC TCAAGGAGAT GGGCGAGTTC GTGCGTTCTG CGAGCTCCAC CGTCGAACCG
CCGGTCATCC GGCGGCTGAA GGACAAGTTC CCCACCGAGG GCGGCGCGGC GTCGCGTCCC
GCCCCGGCGG TCAAGCCGGG TCCCCGCCTG CCCCAGGGCG CCCGTCCGGG TCCCGCACCC
GCGGCGCGTC CGCAGGCACC GGCCCCGGCG CAGCCGGCGC CCCCGCAGCC GGCACCCGCC
GCTGCGAGCA CCCCCGCCCC GGCACCGGCC CCCGCGCCGC GCCCGGCGGA GCCGGCCGCG
AACCCCGCGC CGGCCGCACC CCCGGCCTTC CAGGCTCCGG CACCCGCTCC GGCGGAGCGT
CCGGCCGCCG CCCAGCGTCC CGCGGCCCCC GCGCCGCAGC GCCCGGCCCC GGCCGGCCGT
CCCTCGACCC CGCCCGTCTC GGGCGGTCCC GGTCAGGGTC CCCGTCCCGG TGCGCGTCCC
GGCGGCCCGG GTGCTCCCGG TGCCCGTCCC GGCGCTCCCG GCGCCGGTGG TCCTGGGGCG
CGCCGTCCCG GCCCGGGCGA CCGTCCCGAG CGCAGCGAGC GTCCCGACCG CGGTGACCGT
CCCCAGGGCG ACCGCCCCCG CAGCGACCGT CCCCAGGGCG AGCGTCAGCA GGGCGACCGC
CCCCAGGGCG ACCGTCCGGG TCGTCCCGGC GCGCCCGGTG GCGCTCCCCG TCCCGGGGCC
GGTGCTCCGC GCCCGGGCAA CAACCCGTTC GCGCCCAGCC AGGGGATGCC CCGTTCGCAG
GGTGACCGCC CCGGTGGGGC TCCGCGCCCG GGCAACAACC CGTTCGCGTC CAACCAGGGC
ATGCCGCGTC CGCAGGGCGG GCCCCGTCCC ACCCCGGCCG GTCCCGGTGG TCCCCGTCCG
GGTGGCCCCC GTCCCAACCC CGGCATGATG CCGGCGCGCC CGACGGTCGG CCGTCCGGGT
GCCGGTCCCG GCGCGGGTCG TCCCGGTGCT CCGGGCCGCG GTGGCCCCGG CGGTGCCCGC
GGTGGCGCCG GCGGTGGCTT CGCCGGTCGT CCCGGTGGTC CCAGTGCCGG TGGTGGCGGC
GGCGGTTTCG CCGGTCGTCC CGGTGGTGGC GGCGGTGGTC CCCGCGGCAA CCGCGGCGGC
ACCCAGGGCG CGTTCGGTCG CGCCGGTGGC CGTCCGGTGC GGGGCCGCAA GTCCAAGCGC
GCGAAGCGCC AGGAGTACGA AGCGATGCAG GCGCCCGCCG TCGGCGGCGT CTCGGTCCGC
CACGGTGACG GGACCACGGT CCTGCGCATC CGTCGCGGCG CCTCGCTGAG CGACTTCGCC
GAGCGCATCG ACGCCGACCC CGCGGCGCTG GTCACGATCC TCTTCCACCT CGGTGAGATG
GCGACCGCGA CGCAGTCGCT GGACGAGGAC ACGTTCCAGC TGCTCGGCGG CGAGCTCGGC
TACGTCATCG AGGTCGTGTC CCCGGAGGAC GAGGAGCGCG AGCTGCTCGC CGGGTTCTCC
ATCGACCTCG ACGCCGAGCT CGAGGCCGAG GGCGACGACG ACCTGTCGGC GCGCCCGCCG
GTCGTCACCG TCATGGGTCA CGTCGACCAC GGCAAGACGA AGCTGCTGGA CGCCATCCGC
TCCTCCGACG TCGTGGCGAA GGAGGCCGGT GGCATCACCC AGCACATCGG CGCCTACCAG
GTCGTCAAGG AGCACGAGGG GATCGAACGC CCGATCACCT TCATCGACAC CCCCGGTCAC
GAGGCCTTCA CGGCCATGCG TGCCCGCGGG GCGAAGGTGA CCGACATCGC GATCCTCGTG
GTGGCGGCCG ACGACGGCGT GATGCCCCAG ACCATCGAGG CGCTCAACCA CGCCCAGGCG
GCCGACGTCC CGATCGTCGT CGCGGTCAAC AAGGTCGACA AGGAAGGCGC GAACCCGGAC
AAGGTCCGGC AGCAGCTGAC CGAGTACAAC CTGGTGGCCG AGGAGTACGG CGGCGACACG
ATGTTCGTCG ACGTCTCCGC GCGGCAGGGC ACGGGCCTGG ACAGCCTCCT CGAGGCCGTC
CTGCTCACCG CCGACGCCTC GCTGGACCTG CGGGCCAACT CCGACAAGGA CGCCCGCGGC
ATCGCGATCG AGGGCAACCT CGACAAGGGC CGCGGCCCCG TCGCCACCGT CCTGGTCCAG
TCCGGGACGC TGCACGTCGG CGACGCGATC GTCGCGGGGA CCGGCTACGG CCGCGTCCGC
GCGATGCTCG ACGAGAACGG CGACGCCGTG CAGGAGGCGA CCCCGTCGCG TCCGGTGCAG
GTCCTGGGCC TCACCTCGGT CCCCGGGGCC GGCGACACCT TCCTCGTCGC TCCCGACGAC
CGGACGGCGC GGCAGATCGC GGAGAAGCGC GAGGCGCAGG AGCGCAACGC GGCTCTGGCC
AAGGCGCGCA AGCGCATCAC GCTGGAGGAC TTCACCAAGG CGCTGCAGCA GGGCAAGGTC
GAGACCCTCA ACCTCATCCT CAAGGGTGAC GGGGCCGGCT CGGTCGAGGC CCTCGAGGAC
GCGCTGTTCA AGATCGACGT CGGCGACGAG GTCGAGCTGC GGGTGATCGA CCGCGGTGTC
GGTGCGGTGA CGAAGAACAA CGTCAACCTC GCCGTCGCCT CGAACGCGAT CATCATCGGG
TTCAACGTGC GCCCGGAGCA GCAGACCAAG GAGTACGCCG ACCGCGAGGG CGTCGACATC
CGCTTCTACT CGGTCATCTA CGCGGCCATC GAGGACGTCG AGGCGTCCCT GAAGGGTCTG
CTCAAGCCCG AGTTCGAAGA GGTCCAGCTC GGCACGGCGG AGGTCCGCGA GATCTTCCGC
TCGTCGAAGT TCGGCAACAT CGCGGGGACG CTGGTCCGCT CGGGTCTGAT CCGACGCAAC
TCCAAGGCGC GCGTCCTGCG CCGGGGTGTC GTGCACGGGG ACAACCTGAC GATCGAGTCG
CTGCGACGCT TCAAGGACGA CGCCACCGAG GTCCGCGAGG GCTACGAGTG CGGCATCGGC
CTGGGGTCGT ACAACGACCT CCAAGTCGAC GACGTCATCG AGACGTACGA GATGCAGGAG
AAGCCGCGCG GCTGA
|
|---|
| Protein sequence | MAKVRVYELA KEFGVESKVV LATLKEMGEF VRSASSTVEP PVIRRLKDKF PTEGGAASRP
APAVKPGPRL PQGARPGPAP AARPQAPAPA QPAPPQPAPA AASTPAPAPA PAPRPAEPAA
NPAPAAPPAF QAPAPAPAER PAAAQRPAAP APQRPAPAGR PSTPPVSGGP GQGPRPGARP
GGPGAPGARP GAPGAGGPGA RRPGPGDRPE RSERPDRGDR PQGDRPRSDR PQGERQQGDR
PQGDRPGRPG APGGAPRPGA GAPRPGNNPF APSQGMPRSQ GDRPGGAPRP GNNPFASNQG
MPRPQGGPRP TPAGPGGPRP GGPRPNPGMM PARPTVGRPG AGPGAGRPGA PGRGGPGGAR
GGAGGGFAGR PGGPSAGGGG GGFAGRPGGG GGGPRGNRGG TQGAFGRAGG RPVRGRKSKR
AKRQEYEAMQ APAVGGVSVR HGDGTTVLRI RRGASLSDFA ERIDADPAAL VTILFHLGEM
ATATQSLDED TFQLLGGELG YVIEVVSPED EERELLAGFS IDLDAELEAE GDDDLSARPP
VVTVMGHVDH GKTKLLDAIR SSDVVAKEAG GITQHIGAYQ VVKEHEGIER PITFIDTPGH
EAFTAMRARG AKVTDIAILV VAADDGVMPQ TIEALNHAQA ADVPIVVAVN KVDKEGANPD
KVRQQLTEYN LVAEEYGGDT MFVDVSARQG TGLDSLLEAV LLTADASLDL RANSDKDARG
IAIEGNLDKG RGPVATVLVQ SGTLHVGDAI VAGTGYGRVR AMLDENGDAV QEATPSRPVQ
VLGLTSVPGA GDTFLVAPDD RTARQIAEKR EAQERNAALA KARKRITLED FTKALQQGKV
ETLNLILKGD GAGSVEALED ALFKIDVGDE VELRVIDRGV GAVTKNNVNL AVASNAIIIG
FNVRPEQQTK EYADREGVDI RFYSVIYAAI EDVEASLKGL LKPEFEEVQL GTAEVREIFR
SSKFGNIAGT LVRSGLIRRN SKARVLRRGV VHGDNLTIES LRRFKDDATE VREGYECGIG
LGSYNDLQVD DVIETYEMQE KPRG
|
|---|
| |